TIMEEVENT DESCRIPTIONLOCATION

UNIVERSE
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1) We are a tiny part of a universe made of an infinite amount of space, matter
and time.




  
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11) There is no time I can identify as the start of the universe, the universe
has no beginning and no end; perhaps the same photons that have always been in
the universe continue to move in the space that has always been.




  
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2) There is more space than matter.



  
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3) All of the matter is made of particles of light humans have named "photons".
Photons are the base unit of all matter from the tiniest particles to the
largest galaxies.1


FOOTNOTES
1. ^ Ted Huntington.
  
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5) Photons generally move 300 million meters every second in a line, but as
pieces of matter, can be slightly slowed from the force of gravity, and stop
for an instant when they collide.1

Photons move 300 million meters every
second in a line but as pieces of matter their velocity changes slightly
because of gravity, and theoretically photons bounce off each other, at which
time they come to a complete stop relative to the rest of the universe for an
instant before bouncing and accelerating away from each other in the opposite
direction.2

FOOTNOTES
1. ^ Ted Huntington
2. ^ Ted Huntington
  
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6) Matter is attracted to other matter and so photons form structures such as
protons, atoms, molecules, molecule groups (like all of life of earth),
planets, stars, galaxies, and clusters of galaxies.

Gravity is responsible for photons
forming Hydrogen, Hydrogen forming nebulas, nebulas forming stars, and stars
forming galaxies.



  
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7) All of the hundreds of billions of galaxies we can see are only a tiny part
of the universe. 1 Most of the galaxies in the universe we will never see
because they are too far away for even 1 particle of light from them to be
going in the exact direction of our tiny location, or are captured by atoms
between here and there. 2

One estimate has 70e21 (sextillion) stars in only
the universe we can see. That is 10 times more stars than grains of sand on
all the earth. 3



FOOTNOTES
1. ^ Carl Sagan, "Cosmos", Carl Sagan Productions, KCET Los Angeles, (1980).
(estimate of how many galaxies)
2. ^ Ted Huntington
3. ^
http://edition.cnn.com/2003/TECH/space/07/22/stars.survey/
  
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4) The patterns in the universe are clear. Photons form gas clouds of Hydrogen
and Helium, these gas clouds, called nebuli condense to form galaxies of stars.
The stars emit photons back out into the rest of the universe, where they
collect and form clouds again. Around each star are many planets and pieces of
matter. On many of those planets intelligent life evolves. This life moves
their stars out of spiral galaxies to form globular clusters, and ultimately to
transform spiral galaxies into elliptical galaxies that travel the universe
looking for more matter to fuel their movement.
It may very well be that stars at this
scale are photons, spiral galaxies charged particles, globular galaxies neutral
particles, and galactic clusters atoms at a much larger scale in an infinite
macro and micro scale.1


FOOTNOTES
1. ^ Ted Huntington
  
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8) That the frequency of photons from the most distant galaxies we can see have
a lower frequency may be due to the effects of gravitation and/or particle
collision in the large distance between source and observer.1

FOOTNOTES
1. ^ Ted Huntington.
  
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13) The Milky Way Galaxy forms, perhaps from a gas cloud that formed by
capturing matter in the form of light from other stars, from the remains of a
previously destroyed galaxy, or some combination of the two.




  
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2
16) The yellow star earth will eventually orbit forms, perhaps in a nebula,
when matter in the nebula starts accumulating and rotating as a result of
gravity, or from the remains of an exploded star that condensed again under the
influence of gravity.

My opinion is that stars contain molten iron in their center,
similar to the earth. {check with supernova remnants} The density of the star
the earth rotates is similar to that of a liquid. The most popular theory to
explain how stars give off so many photons is that these photons exit as a
result of Hydrogen atomically fusing into Helium, and I want to add my opinion
that potentially the pressure of gravity simply separates atoms of Hydrogen and
helium into their source photons. Perhaps the reaction is similar to the
center of the earth where red hot liquid iron emits photons. We obviously do
not explain that red hot molten metal as being the result of nuclear fusion,
but yet it is clearly not oxygen combustion. Clearly there are many photons
exiting stars every second, and each star is losing large amounts of matter in
the form of photons. In addition, the most popular theory explains that most
atoms heavier than Hydrogen and no heavier than Iron are made in stars, and
atoms larger than iron can only be made in supernovae. 1

FOOTNOTES
1. ^ Ted Huntington
2. ^ Ted Huntington, guess
  
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22) Heavier atoms in the star system move closer to the center and lighter
atoms are sent farther out.




  
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17) Planets form around star. Terrestrial planets are red hot, have surface of
melted rock, all lighter atoms float to the surface of the molten planets. All
the H2O from the first earth oceans and lakes is in the atmosphere in gas form.




  
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30) Moon of earth is formed by 1 of 3 ways:
1) spherical planet collides with earth,
moon forms from remaining matter in ring around earth.
2) spherical planet is caught
in earth orbit
3) moon of earth forms naturally from original matter of star system
in orbit around earth.

The Moon orbiting 5 degrees from the axis of the Earth's orbit
implies that the Moon was captured, although 5% is not a particularly large
difference from the plane of the Earth's rotation.1 That the Moon orbits in
the same direction as the Earth is evidence in favor of the Moon forming around
the Earth.2

FOOTNOTES
1. ^ Ted Huntington.
2. ^ Ted Huntington.
  
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3 4
31) Oldest meteorite yet found on earth 4,571 million years old.1 2

FOOTNOTES
1. ^
http://www.sciencemag.org/cgi/content/full/288/5472/1819?maxtoshow=&HITS=10&hits
=10&RESULTFORMAT=&fulltext=zag+morocco&searchid=1129920472874_9236&stored_search
=&FIRSTINDEX=0#RF2

2. ^ http://news.bbc.co.uk/1/hi/sci/tech/783048.stm
3. ^
http://www.sciencemag.org/cgi/content/full/288/5472/1819?maxtoshow=&HITS=10&hits
=10&RESULTFORMAT=&fulltext=zag+morocco&searchid=1129920472874_9236&stored_search
=&FIRSTINDEX=0#RF2
(4.7 +- .2 billion years)
4. ^ sci has 4.7 +- .2 by where did 4.571
come from?
  
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33) Oldest Moon rock returned from Apollo missions (4.53 billions old).



  
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24) Oldest meteor and moon (although no earth) rocks date from this time 4.5
billion years before now.




  

LIFE
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50) Start Precambrian Eon, Hadean Era.1 2

FOOTNOTES
1. ^ The geological Society of America ucmp.berkeley.edu
2. ^ Richard Cowen, "History of Life",
(Malden, MA: Blackwell, 2005).
  
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21) Planet earth cools, molten rock cools into thin crust, H2O condenses from
the atmosphere by raining, filling the lowest parts of land to make the first
earth oceans, lakes, and rivers.1


FOOTNOTES
1. ^ part about rain and streams going to bottom of land:
http://www.ersdac.or.jp/Others/geoessay_htm/geoessay_e/geo_text_09_e.htm
  
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34) Oldest "terrestrial" (not from meteorite) zircon yet found on earth, 4.404
billion years old, from Gneiss in West Australia, is evidence that the crust
and liquid water were on the surface of earth 4.4 billion years before now.1


FOOTNOTES
1. ^ http://www.nature.com/nature/links/010111/010111-1.html
  
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18) Amino acids, phosphates, and sugars, the components of living objects are
created on earth. These molecules are made in the oceans, fresh water, and or
atmosphere of earth (or other planets) by lightning, photons with ultraviolet
frequency from the star, or ocean floor volcanos.




  
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19) How nucleic acids (polymers made of nucleotides), proteins (polymers made
of amino acids), carbohydrates (polymers made of sugars) and lipids (glycerol
attached to fatty acids) evolved is not clearly known.

Some proteins and nucleic acids have been formed in labs by using clay which
can dehydrate and which provides long linear crystal structures to build
proteins and nucleic acids on. Amino acids join together to form polypeptides
when an H2O molecule is formed from a Hydrogen (H) on 1 amino acid and a
hydroxyl (OH) on the second.

Are all proteins, carbohydrates, lipids and DNA the products of living objects?
Is RNA the only molecule of these that was made without the help of living
objects?

The most popular theory now has RNA (and potentially lipids) evolving first
before any living objects.

There is still a large amount of experiment, exploration and education that
needs to be done to understand the origins of living objects on planet earth.
My opinion is that as soon as there was liquid water on the earth, 4.4 billion
years before now, as zircon crystals show, the construction of living objects
started on earth.


  
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25) RNA duplication evolves.

Perhaps RNA molecules, called "ribozymes" evolved which can make copies of RNA,
by connecting free floating nucleotides that match a nucleotide on the same or
a different RNA, without any proteins. But until such ribozyme RNA molecules
are found, the only molecule known to copy nucleic acids are proteins called
polymerases. If such ribozymes exist, then one of the first coded instructions
on the RNA molecule that was the ancestor of every living species, must have
been the code to make this ribozyme.

These early RNA molecules may have been protected
by liposomes (spheres of lipids).

This process of RNA (and then later DNA) duplication is the most basic aspect
of life on earth, and for all the diversity, the one common element of all life
is this constant process of DNA duplication, which will later evolve to include
cell division. This starts the unbroken thread of copying and division that
connects the earliest ancestor, some RNA molecule, to all life on earth that
has ever lived.



  
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167) Protein assembly evolves with the creation of various Transfer RNA (tRNA)
molecules.

Random mutations in the copying (and perhaps even in the natural formation) of
RNA molecules probably created a number of the necessary tRNAs (transfer RNA,
an RNA molecule responsible for matching free floating amino acid molecules to
3 nucleotide sequences on other RNA molecules).

This would be a precellular protein assembly system, where tRNA (transfer RNA)
molecules can build polypeptide chains of amino acids by linking directly to
other RNA strands.

Part of each tRNA molecule bonds with a specific amino acid, and a 3 nucleotide
sequence from a different part of the tRNA molecule bonds with the opposite
matching 3 nucleotide sequence on an (m)RNA molecule.

Since there are tRNA molecules for each amino acid (although some tRNAs can
attach to more than one amino acid?), there must have been a slow accumulation
of various tRNA molecules for each of the 20 amino acids used in constructing
polypeptides in cells living now. Perhaps after the evolution of the first
tRNA, the first polypeptides were chains of all the same one amino acid. With
the evolution of a second tRNA polypeptides would have more variety because now
two amino acids would be available to build polypeptides.

This polypeptide assembly system may exist freely in water, or within a
liposome1 . This sytem builds many more proteins than would be built without
such a system. The mRNA with the code to make copier RNA, now also contains
the code to produce various tRNA molecules. These molecules function as a
unit, and proto-cell, with the rest of the mRNA initially containing random
codes for random proteins.

For the first time, RNA code represents a template for other RNA molecules, but
also a template for building proteins with the help of tRNA molecules.

There is some question of where the origin of the first cell took place, near
volcanos on the ocean floor, or in fresh water lakes and tidal pools near
volcanos on land, because unprotected nucleic acids cannot exist for much time
in the ocean because of Sodium and Chlorine.

What were the first amino acids connected
as proteins? Were the first proteins all made with the same amino acid?

  
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168) Ribosomal RNA (rRNA) evolves. Ribosomal RNA moves down mRNA molecules
functioning as a platform for bringing the mRNA and tRNA molecules together to
assemble polypeptides (proteins).

This rRNA serves as an early ribosome; objects that serve as sites for building
polypeptides and are found in every cell. As time continues the ribosome will
grow to include two more RNA molecules, some protein molecules, and a second
half that will make polypeptide construction more efficient.

The rRNA serves the purpose of bringing amino acids close enough to bond with
each other to form polypeptides.

As an rRNA moves down an mRNA, tRNA molecules bond with the mRNA and on the
opposite side of the tRNA, a matching amino acid (separates? from the tRNA and)
attaches to a growing polypeptide chain.

Now the mRNA that is the ancestral/progenitor of all of life, contains the code
for the copier RNA, tRNAs, and the rRNA molecule. These nucleic acids function
as a unit, and proto-cell.




  
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211) The first protein of real importance is built, an RNA polymerase. A
molecule that can more efficiently copy RNA.

The first protein of real importance
is evolved by RNA and assembled by the early ribosome, an RNA polymerase. A
molecule that can more efficiently copy RNA.



  
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41) A ribonucleotide reductase protein is built by the early ribosome protein
making protocell. This protein changes ribonucleotides into
deoxyribonucleotides. This allows the first DNA molecule on earth to be
assembled.

Ribonucleotide reductase may be the molecule that allowed DNA to be the
template for the line of cells that survived to now.




  
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212) A DNA polymerase protein evolves to copy DNA by assembling DNA nucleotides
from other DNA molecules.




  
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166) An RNA molecule evolves that causes the early ribosome to create reverse
transcriptase, a protein that can assemble DNA molecules from an RNA molecule
template.

With this advance, a DNA molecule can be constructed that has all of the code
that was stored on the long evolved RNA molecule. DNA now serves as a more
stable template for making mRNA, each tRNA, rRNA, and the RNA and DNA
polymerases.

RNA polymerase proteins build RNA molecules using the new DNA template, that
still perform their original polypeptide building function together with the
tRNA and rRNA molecules, but are labeled "mRNA" (Messenger RNA) because they
move from DNA to ribosome.

Why DNA serves as the template for all cells and not mRNA is
not fully understood, but DNA is a more stable molecule than the single
stranded RNA. Perhaps the 2 legs of DNA serve some other important reasons,
for example, two legs may allow two processes to happen at one time.



  
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20) The first cell membrane evolves around DNA, made of proteins. This
membrane holds water inside a cell. This is the first cell. rRNA comparison
shows that this is most likely a eubacterium.1

DNA produces instructions for cytoplasm, the cytoplasm is assembled from
proteins made by the ribosome. For the first time, DNA and ribosomes are
building cell structure. The templates for each tRNA, rRNA, mRNA and DNA
polymerase proteins are already coded in a central strand of DNA. DNA
protected by cytoplasm is more likely to survive and copy. This cell is
heterotrophic and has no metabolism to produce ATP. Amino acids, nucleotides,
H2O, and other molecules enter and exit the cytoplasm only because of a
difference in concentration from inside and outside the cell (passive
transport) and represent the beginnings of the first digestive system. This
either happens in fresh water lakes or in salty oceans, perhaps near lava vents
on or under the ocean floor. As this line of DNA continues to make copies of
itself, all copies now have cytoplasm. The DNA is composed mainly of
instructions to assemble the nucleic acids and proteins needed to build
ribosomes, polymerases and cytoplasm.

This cell structure forms the basis of all future cells of every living object
on earth. These first cells are anaerobic (do not require free oxygen) and
heterotrophic, meaning that they do not make their own food: amino acids,
nucleotides, phosphates, and sugars. These bacteria depend on these molecules
and photons in the form of heat to reproduce and grow.

A system of division must evolve which attaches the original and newly
synthesized copy of DNA to the cytoplasm, so that as the cell grows, the two
copies of DNA can be separated and the first membraned cells can divide into
two cells. This is the beginning of the "binary fission" method of cell
division. Division of the cell begins with the division of the DNA
membrane-attachment site and separates by the growth of new cytoplasm.

DNA has 2
functions, 1) to be copied by the polymerase protein, 2) to serve as a code for
assembling proteins.
Two important evolutionary steps evolve: DNA duplication
in cytoplasm, and cell (DNA with cytoplasm) division.

The process of DNA duplication is probably similar if not the same process
using the same proteins that were used to duplicate DNA without cytoplasm.

  
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26) Perhaps DNA that is connected in a circle allows the DNA polymerase to make
continuous copies of the cell.

In theory prokaryote cells do not deteroiate from the
effect of aging, but they do endure mutations (from photons with ultraviolet
frequency, for example), however, there are many other ways prokaryotes can be
destroyed (loss of water, physically damaged by nonliving objects, eaten by
other organisms, and other mechanisms).



  
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195) Proteins that actively transport molecules into and out of the cytoplasm
(facilitative diffusion) evolve.1


FOOTNOTES
1. ^ http://www.cat.cc.md.us/~gkaiser/biotutorials/eustruct/cmeu.html
  
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23) The first viruses are made either from bacteria, or are initially bacteria.
These cells depend on the DNA duplicating and protein producing systems of
other cells to reproduce themselves. Over time, more effective, and efficient
virus designs will survive.1


FOOTNOTES
1. ^ http://cellbio.utmb.edu/cellbio/rer2.htm
  
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28) Glycolysis evolves in the cytoplasm. Cells can now make ATP from glucose
and eventually other monosaccharides, the end product is pyruvate.

The glycolysis equation is:
C6H12O6 (glucose) + 2 NAD+ + 2 ADP + 2 P -----> 2
pyruvic acid, (CH3(C=O)COOH + 2 ATP + 2 NADH + 2 H+




  
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44) Fermentation evolves in the cytoplasm. Cells (all anaerobic) can now make
more ATP and convert pyruvate (the final product of glycolysis) to lactate (an
ionized form of lactic acid).1


FOOTNOTES
1. ^
http://216.239.63.104/search?q=cache:3s2stckAJoMJ:www.nmc.edu/~ftank/115f04/Ch%2
5209%2520Notes.pdf+cellular+respiration+oldest&hl=en

  
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213) A second kind of fermentation evolves in the cytoplasm. Cells (all
anaerobic) can now convert pyruvate (the final product of glycolysis) to
ethanol.1


FOOTNOTES
1. ^
http://216.239.63.104/search?q=cache:3s2stckAJoMJ:www.nmc.edu/~ftank/115f04/Ch%2
5209%2520Notes.pdf+cellular+respiration+oldest&hl=en

  
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1
183) Cells evolve that make proteins that can assemble lipids.

FOOTNOTES
1. ^ find biomarker evidence
  
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196) Cells that use both proteins and metabolism (ATP) to transport molecules
into and out of the cytoplasm (active transport) evolve.1


FOOTNOTES
1. ^ http://www.cat.cc.md.us/~gkaiser/biotutorials/eustruct/cmeu.html
  
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40) One of the first useful proteins to be created with an early precellular
protein production system must have been a protein (like RNA polymerase) that
can make copies of RNA from mRNA molecules. This protein may have outperformed
a ribozyme that was performing the copying function. Eventually mRNA that
coded for tRNA molecules and mRNA that coded for rRNA molecules merged to form
a template. Now the entire protein production system (the mRNA itself, tRNAs,
rRNAs, and the RNA polymerase) could be copied many times by the RNA polymerase
protein.

This is before cytoplasm or any cell wall has evolved. RNA and DNA copying
happens in water, the first cell has not evolved yet.




  
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76) Pili, plasmids and conjugation evolves in prokaryotes. Now some
prokaryotes can exchange circular pieces of DNA (plasmids), through tubes
(pili). Conjugation may be the process that led to sex (cellular fusion) and
also the transition from a circle of DNA to chromosomes in eukaryotes, since
some protists (cilliates and some algae) reproduce sexually by conjugation.1

Ar
chaeal flagellins are related to members of the type IV pilin/transport
superfamily widespread in bacteria.
In addition to pili and conjugation, proteins evolve
that can assist in splitting DNA and also proteins that assist in merging two
strands of DNA together, since some times the DNA in split and the new plasmid
is connected and the DNA circle is sown back together.2

FOOTNOTES
1. ^ conjugation in protists, flagella in eukaryotes: Michael Sleigh,
"Protozoa and Other Protists", (London; New York: Edward Arnold, 1989).
2. ^
prokaryote pili and archaea flagella related:
http://www.queens-pfd.ca/people/index.cfm?meds=profile&profile=12
  
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292) Prokaryote flagella evolve.1
Perhaps pili evolved into flagella, flagella
into pili, or the two systems are unrelated.2

Proteins in Archaebacteria flagella are related to pili in bacteria.

This may be the beginning of motility. Now for the first time, cells are not
completely controlled by surrounding matter, but can make limited choices about
their location.

FOOTNOTES
1. ^ conjugation in protists, flagella in eukaryotes: Michael Sleigh,
"Protozoa and Other Protists", (London; New York: Edward Arnold, 1989).
2. ^
prokaryote pili and archaea flagella related:
http://www.queens-pfd.ca/people/index.cfm?meds=profile&profile=12
  
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64) Operons, sequences of DNA that allow certain proteins coded by DNA to not
be built, evolve. Proteins bind with these DNA sequences to stop RNA polymerase
from building mRNA molecules which would be translated into proteins. Operons
allow a bacterium to produce certain proteins only when necessary. Bacteria
before now can only build a constant stream of all proteins encoded in their
DNA.1 2


FOOTNOTES
1. ^
http://info.bio.cmu.edu/Courses/03441/TermPapers/99TermPapers/GenEvo/operon.html

2. ^ http://web.indstate.edu/thcme/mwking/gene-regulation.html#table
  
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322) Nitrogen fixation evolves in eubacteria.
Without bacteria that convert N2 into
nitrogen compounds, the supply of nitrogen necessary for much of life would be
seriously limited and would drastically slow evolution on earth.

Nitrogen fixation is
the process by which nitrogen is taken from its relatively inert molecular form
(N2) in the atmosphere and converted into nitrogen compounds useful for other
chemical processes (such as, notably, ammonia, nitrate and nitrogen dioxide).1


Nitrogen fixation is performed naturally by a number of different prokaryotes,
including bacteria, and actinobacteria certain types of anaerobic bacteria.
Many higher plants, and some animals (termites), have formed associations with
these microorganisms.2



FOOTNOTES
1. ^ "Nitrogen fixation". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Nitrogen_fixation
2. ^ "Nitrogen fixation". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Nitrogen_fixation
  
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287) Multicellularity in the form of filment growth evolves in prokaryotes.
Cyanobacteria
grow in filaments.

Unlike eukaryotes, there is no communication between cells in prokaryote
filments.



  
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2
316) Cell differentiation in prokaryotes evolve. Heterocysts evolve in
cyanobacteria.

Heterocysts are specialized nitrogen-fixing cells formed by some filamentous
cyanobacteria during nitrogen starvation.

What cell differentiation is first is unknown,
perhaps cells that form spores, or cysts, or perhaps cell differentiation that
is observes in cyanobacterial filamentous cells.

Heterocysts are specialized nitrogen-fixing cells formed by some filamentous
cyanobacteria, such as Nostoc punctiforme and Anabaena sperica, during nitrogen
starvation. They fix nitrogen from dinitrogen (N2) in the air using the enzyme
nitrogenase, in order to provide the cells in the filament with nitrogen for
biosynthesis. Nitrogenase is inactivated by oxygen, so the heterocyst must
create a microanaerobic environment. The heterocysts' unique structure and
physiology requires a global change in gene expression. For example,
heterocysts:

* produce three additional cell walls, including one of glycolipid that
forms a hydrophobic barrier to oxygen
* produce nitrogenase and other proteins
involved in nitrogen fixation
* degrade photosystem II, which produces oxygen
* up
regulate glycolytic enzymes, which use up oxygen and provide energy for
nitrogenase
* produce proteins that scavenge any remaining oxygen

Cyanobacteria usually obtain a fixed carbon (carbohydrate) by photosynthesis.
The lack of photosystem II prevents heterocysts from photosynthesising, so the
vegetative cells provide them with carbohydrates, which is thought to be
sucrose. The fixed carbon and nitrogen sources are exchanged though channels
between the cells in the filament. Heterocysts maintain photosystem I, allowing
them to generate ATP by cyclic photophosphorylation.

Single heterocysts develop about every 9-15 cells, producing a one-dimensional
pattern along the filament. The interval between heterocysts remains
approximately constant even though the cells in the filament are dividing. The
bacterial filament can be seen as a multicellular organism with two distinct
yet interdependent cell types. Such behaviour is highly unusual in prokaryotes
and may have been the first example of multicellular patterning in evolution.
Once a heterocyst has formed, it cannot revert to a vegetative cell, so this
differentiation can be seen as a form of apoptosis. Certain heterocyst-forming
bacteria can differentiate into spore-like cells called akinetes or motile
cells called hormogonia, making them the most phenotyptically versatile of all
prokaryotes.

The mechanism of controlling heterocysts is thought to involve the diffusion of
an inhibitor of differentiation called PatS. Heterocyst formation is inhibited
in the presence of a fixed nitrogen source, such as ammonium or nitrate. The
bacteria may also enter a symbiotic relationship with certain plants. In such a
relationship, the bacteria do not respond to the availability of nitrogen, but
to signals produced by the plant. Up to 60% of the cells can become
heterocysts, providing fixed nitrogen to the plant in return for fixed carbon.

The cyanobacteria that form heterocysts are divided into the orders Nostocales
and Stigonematales, which form simple and branching filaments respectively.
Together they form a monophyletic group, with very low genetic variability.1

FO
OTNOTES
1. ^ "Heterocyst". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Heterocyst
2. ^ Ted Huntington, a tital guess my friends
  
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58) First autotrophic cells, cells that can produce some if not all of their
own food (amino acids, nucleotides, sugars, phophates, lipids, and
carbohydrates), but require phosphorus, nitrogen, CO2, water and light in the
form of heat.1

There are only 2 kinds of autotrophy: Lithotrophy and Photosynthesis. These
are lithotrophic cells that change inorganic (abiotic) molecules into organic
molecules. These cells are archaebacteria, called methanogens that perform the
reaction: 4H2 + CO2 -> CH4 + 2H2O. They convert CO2 into Methane. Methane is
better than CO2 for trapping heat, and could have contributed to heating the
earth.


FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
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49) First photosynthetic cells. These cells only have Photosystem I.
Photosynthesis Photosystem I evolves in early anaerobic prokaryote cells. One
of two photosythesis systems, photosystem I uses a pigment chlorophyll A,
absorbs photons in 700 nm wave lengths best, breaking the bond betwenn H2 and
S. They are anaerobic and perform the reaction: H2S (Hydrogen Sulfide) + CO2
+ light -> CH2O (Formaldehyde) + 2S.

Only 5 phyla of eubacteria can
photosynthesize.1

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).
  
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43) Photosynthesis Photosystem II evolves in early prokaryote cells.
Photosystem 2 absorbs photons best at 680nm wavelengths, a higher frequency of
light than Photosystem I. These cells can break the strong Hydrogen bonds
between Hydrogen and Oxygen in water molecules (more abundant than Sulphur).
This system emits free Oxygen.1

The simple equation of photosynthesis is: 6 H2O + 6 CO2 + photons = C6H12O6
(glucose) + 6O2. The detailed steps of photosynthesis are called the "Calvin
Cycle". Prokaryote cells can now produce their own glucose to store and be
converted to ATP by glycolysis and fermentation later.

This sytem is the main system responsible for producing the Oxygen now in the
air of earth.

Of the 5 phyla of eubacteria that can photosynthesize, only 1,
cyanobacteria, produces oxygen.

  
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1
57) Cellular Respiration (also called the "Citric Acid Cycle", and the "Krebs
Cycle") evolves, probably in cyanobacteria, as a substitute for fermentaton, by
using oxygen to break down the products of glycolysis, pyruvic acid, to CO2 and
H2O, producing 18 more ATP molecules.1
This is the first aerobic cell, a cell
that has an oxygen based metabolism. This cell uses oxygen to convert glucose
(and eventually other sugars and fats) into CO2, H2O and ATP. For example,
cells that oxidize glucose perform the reaction:
C6H12O6 + 6 O2 + 38 ADP + 38 phosphate
-> 6 CO2 + 6 H2O + 38 ATP
This reaction (with glycolysis) can produce up to 36 ATP
molecules. Cellular respiration is the opposite (although the specific
reactions differ) of photosynthesis which starts with H2O and CO2 and produces
glucose.

Steps are:
Glycolysis preparatory phase
Glycolysis pay-off phase
Oxidative carboxylation
Krebs cycle

FOOTNOTES
1. ^ "Aerobic organism". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Aerobic_organism
  
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27) DNA (or RNA) produces instructions for a cell wall. The cell wall only
protects bacteria and does not filter any molecules as the cytoplasm does.

is first
gram-negative cell wall?

1. Only contain a few layers of peptidoglycan -- the building block for
strong, rigid cell walls
2. Contain an outer membrane, external to the
peptidoglycan, called the lipopolysaccharide
3. The space between the layers of peptidoglycan
and the secondary cell membrane is called periplasmatic space
4. The S-layer is
directly attached to the outer membrane, rather than the peptidoglycan
5. Any flagella, if
present, have 4 supporting rings instead of two
6. No teichoic acids are
present"



  
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29) There are many proteins and secondary processes in cells that are not fully
understood yet.




  
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42) More prokaryote cell fossils need to be found, more DNA needs to be
sequenced, and more bacteria found and grown to fully understand when bacteria
parts evolved. For example:
flagella
plasmids
pili and "conjugation" the trade of pieces of plasmid DNA (this may be the
earliest form of sex {or syngamy})
changing into spores

When gram-stain positive cell walls evolved.

When the various shapes evolved:
spherical (coccus,cocci)
rod (bacillus,bacilli)
spiral (spirilla)
other:
short rods (coccobacilli).
commas (vibrii).
squares (rare)
stars (rare)
irregular (rare)

Which specific bacteria of the Archaea (if any) were first, which of the
Eubacteria and Cyanobacteria came next.

When the "Nitrogen Cycle" or "Nitrogen Fixing" evolved. Few cells can separate
N2 into N, (needed for nucleic acids?1 ). The waste product urea is converted
by one bacteria to ammonia, a second bacteria converts the ammonia to N2.

FOOTNOTES

1. ^ Ted Huntington.
  
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1 2 3 4 5 6 7
77) There are many widely varying estimates of when the first Eubacteria and
Archaea evolved. Eubacteria and Archaea (also called Archaebacteria) are the
two major lines of Prokaryotes. Prokaryotes are the most primitive living
objects ever found. In contrast to the later evolved Eukaryotes, Prokaryotes
have a circle of DNA located in their cytoplasm (not chromosomes) and have no
nucleus. At least one genetic comparison shows Eubacteria and Archaea evolving
now.1 2 3 4 5 6 7

After the full genomes of all living species are known, and understood we will
have more certainty about the history of evolution. Many genetic trees are
based on DNA genes (sequences of DNA that define nucleic acids or proteins).
In particular the genes for ribosomal RNA are thought to be very conserved over
time, although perhaps genes for reproduction, or cytoplasm, for example may
later prove to be more conserved over time.

Only when the full genomes of all living
species are known, and understood will we have strong certainty about the
history of evolution. Many genetic trees are based on DNA genes (sequences of
DNA that define nucleic acids or proteins), in particular ribosomal RNA which
is thought to be highly conserved over the eons of time. Ribosomal RNA may be
the best record of evolutionary history, but perhaps other genes, for example,
those involved with reproduction, or cytoplasm will prove to be more conserved
or better estimates of evolutionary history. For example, I think the method
of reproduction would be the most conserved, since that process is the most
necessary for survival, changes to those genes may stop continued existence,
where changes to rrna may not be as serious. In addition, the vast diversity
and change in reproductive method over time, should tell us that similar large
scale changes could have happened for rrna, cytoplasm, and indeed any part of a
cell.


These early Archaea and Eubacteria are "thermophile" bacteria, bacteria that
are found and grow best in hot water (80+ degrees Celsius). That genetic
evidence puts these prokaryotes as the oldest living prokaryotes is evidence
that the first prokaryotes on earth may have lived in hot water, perhaps near
thermal springs or near ocean floor volcanos. Perhaps the water on the early
earth was hot when these first prokaryotes evolved.

FOOTNOTES
1. ^ http://www.nature.com/nrg/journal/v3/n11/full/nrg929_fs.html
2. ^ Russell F. Doolittle, Da-Fei Feng, Simon Tsang, Glen Cho, Elizabeth
Little, "Determining Divergence Times of the Major Kingdoms of Living Organisms
with a Protein Clock", Science, (1996). 2142-1873my (2142-1873my)
3. ^ Richard Dawkins, "The
Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004). 2300my (2300my)
4. ^
Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote evolution:
insights into the origin of methanogenesis, phototrophy, and the colonization
of land", BMC Evolutionary Biology, (2004). 4100my (has arche b4 eu) (4100my)
5. ^
Osawa, S., Honjo, "Archaebacteria vs Metabacteria : Phylogenetic tree of
organisms indicated by comparison of 5S ribosomal RNA sequences.", (Tokyo:
Springer, Tokyo/ Berlin eds.:"Evolution of Life", pp. 325-336,, 1991). 1800my
(1800my)
6. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). 4000my (4000my)
7. ^ S.
Blair Hedges and Sudhir Kumar, "Genomic clocks and evolutionary timescales",
Trends in Genetics Volume 19, Issue 4 , April 2003, Pages 200-206, (2003).
3970my (3970my)
  
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180) The Archaea Phylum, Euryarchaeotes evolve.1 2 3
Genetic comparison shows
the Archaea Phylum, Euryarchaeotes evolving now.

The Euryarchaeota are a major group of Archaea. They include the methanogens,
which produce methane and are often found in intestines, the halobacteria,
which survive extreme concentrations of salt, and some extremely thermophilic
aerobes and anaerobes. They are separated from the other archaeans based mainly
on rRNA sequences.4

Euryarchaeota may contain the most ancient DNA of any living object on earth.

FOOTNOTE
S
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ nature v417 n6886
3. ^ Battistuzzi, Feijao, Hedges, "A Genomic
timescale of prokaryote evolution: insights into the origin of methanogenesis,
phototrophy, and the colonization of land", BMC Evolutionary Biology, (2004).
4. ^
"Euryarchaeota". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Euryarchaeota
5. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote evolution:
insights into the origin of methanogenesis, phototrophy, and the colonization
of land", BMC Evolutionary Biology, (2004).
  
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5
181) The Archaea Phylum, Crenarchaeotes evolves.1 2 3
Genetic comparison shows
Archaea Phylum, Crenarchaeotes evolving now.

The phylum Crenarchaeota, commonly referred to as the crenarchaea, in the
domain Archaea, contains many extremely thermophilic and psychrophilic
organisms. They were originally separated from the other archaeons based on
rRNA sequences, since then physiological features, such as lack of histones
have supported this division. Until recently all cultured crenarchaea have been
thermophilic or hyperthermophilic organisms, some of which have the ability to
grow up to 113 degrees C. These organisms stain gram negative and are
morphologically diverse having rod, cocci, filamentous and unusually shaped
cells.4

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ nature v417 n6886
3. ^ Battistuzzi, Feijao, Hedges, "A Genomic
timescale of prokaryote evolution: insights into the origin of methanogenesis,
phototrophy, and the colonization of land", BMC Evolutionary Biology, (2004).
4. ^
"Crenarchaeota". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Crenarchaeota
5. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote evolution:
insights into the origin of methanogenesis, phototrophy, and the colonization
of land", BMC Evolutionary Biology, (2004).
  
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35) Metamorphic rock, a Gneiss near Acasta and Great Slave Lake in the North
West territories of Canada dates from this time, 4030 million years before
now.1 2 3 4

FOOTNOTES
1. ^ http://pubs.usgs.gov/gip/geotime/age.html
2. ^ http://www.geol.umd.edu/~tholtz/G102/102arch1.htm
3. ^
http://chigaku.ed.gifu-u.ac.jp/chigakuhp/dem/tec/history/isua.html
4. ^ http://www.mediaworkshop.org/techcamp/groupc/geology/geohome.htm
  
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4
193) Eubacteria "Hyperthermophiles" (Aquifex, Thermotoga, etc.) evolve now.1 2

Genetic comparison shows that Eubacteria "Hyperthermophiles" (Aquifex,
Thermotoga, etc.) evolve now.

This may be the living object with the most primitive DNA found on earth
(depending on the age of the archaea).
This group of eubacteria includes the
Phyla "Aquificae", "Thermodesulfobacteria", and "Thermotogae".

The Aquificae phylum is a diverse collection of bacteria that live in harsh
environmental settings. They have been found in hot springs, sulfur pools, and
thermal ocean vents. Members of the genus Aquifex, for example, are productive
in water between 85 to 95 °C. They are the dominant members of most
terrestrial neutral to alkaline hot springs above 60 degrees celsius. They are
autotrophs, and are the primary carbon fixers in these environments. They are
true bacteria (domain eubacteria) as opposed to the other inhabitants of
extreme environments, the Archaea.

Thermotoga are thermophile or hyperthermophile bacteria whose cell is wrapped
in an outer "toga" membrane. They metabolize carbohydrates. Species have
varying amounts of salt and oxygen tolerance. Thermotoga subterranea strain
SL1 was found in a 70°C deep continental oil reservoir in the East Paris
Basin, France. It is anaerobic and reduces cystine and thiosulfate to hydrogen
sulfide.3

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).
2. ^ Brocks, Buick, "A
reconstruction of Archean biological diversity based on", Geochimica et
cosmochimica acta, (2003).
3. ^ "Aquifex". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Aquifex
4. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote evolution:
insights into the origin of methanogenesis, phototrophy, and the colonization
of land", BMC Evolutionary Biology, (2004).
  
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36) The oldest sediment on earth is also the oldest Banded Iron Formation, on
Akilia Island in Western Greenland. The oldest evidence for life on earth was
found in this rock by measuring the ratio of carbon 12 to carbon 13 in grains
of apatite (calcium phosphate) from this rock. Life uses the lighter Carbon-12
isotope and not Carbon-13 and so the ratio of carbon-12 to carbon-13 is
different from a nonliving source (calcium carbonate or limestone).1 2


FOOTNOTES
1. ^ Mojzsis, et al. nature nov 7, 1996
http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v384/n6604/index
.html,
2:102,
2. ^
http://jersey.uoregon.edu/~mstrick/RogueComCollege/RCC_Lectures/Banded_Iron.html

  
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45) This marks the beginning of the Banded Iron Formation Rocks. These rocks
are sedimentary. They are made of iron rich chert (silicates, like SiO2).
These rocks have alternative bands of orange or yellow and black. In the red
parts the iron is oxydized (contains iron oxides, either hematite {Fe2O3 =
rust} or magnetite {Fe3O4]}).1 2 3 4 5

These bands may have formed because photosynthetic bacteria (in stromatolites
found in shallow ocean shores, and purple bacteria floating in water) produce
oxygen from CO2 during photosynthesis. When the level of oxygen in the water
became too high, many bacteria died, and this cycle created the BIF. But BIF
also may form naturally when photons in uv frequencies split H2O into H2 and
O2. So perhaps the BIF bands represent cycles of more or less uv light
reaching the earth. Perhaps the alternating phenomenon is similar to
eukaryotic algal blooms. In any event, this free oxygen bonded with the many
tons of iron dissolved in the water to form insoluable iron oxide which then
fell to the ocean floor to form the orange layers of Banded Iron Formation.
How these alternating bands are made is not clear and has not yet been
duplicated in a lab.

This cycle of alternating orange and black bands will continue for 2 billion
years until 1,800 million years before now. This is the beginning of oxygen
production on earth, the atmosphere of earth still has only small amounts of
oxygen at this time.

It is amazing that people are still not certain what was the
cause of the oxygen, and the cycles that deposited the banded Iron Formation.

  
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189) Fossils from Isua Banded iron formation, SW Greenland.1 2
FOOTNOTES
1. ^ Hans D. Pflug, "Earliest organic evolution. Essay to the memory of
Bartholomew Nagy",Precambrian Research Volume 106, Issues 1-2, 1 February
2001, Pages
79-91. http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VBP-42G6M5T-7
&_user=4422&_coverDate=02%2F01%2F2001&_fmt=full&_orig=browse&_cdi=5932&view=c&_a
cct=C000059600&_version=1&_urlVersion=0&_userid=4422&md5=d61bf36f008d6b2cba3ba5d
bd5a628d7&ref=full#bib9

2. ^ Schopf, J.W., 1993. Microfossils from the early Archean Apex chert: New
evidence of the antiquity of life. Science 260, pp. 640-646. Abstract-GEOBASE
Abstract-MEDLINE
  
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51) End Hadean Era, start Archean Era.1 2

FOOTNOTES
1. ^ The geological Society of America ucmp.berkeley.edu
2. ^ Richard Cowen, "History of Life",
(Malden, MA: Blackwell, 2005).
  
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3
185) Isoprene compounds from Isua, Greenland Banded Iron Formation sediment are
evidence of the existence of Archaea.1 2


FOOTNOTES
1. ^ http://www.ucmp.berkeley.edu/archaea/archaeafr.html
2. ^ Jürgen Hahn & Pat Haug. 1986. Traces of Archaebacteria in ancient
sediments. System. Appl. Microbiol. 7: 178-183. (Archaebacteria '85
Proceedings).
3. ^ http://www.ucmp.berkeley.edu/archaea/archaeafr.html
  
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2
186) Sulfur isotope ratios (34S/32S) and Hydrocarbon molecules (alkanes)
detected in 3760 billion year old Isua Banded Iron Formation, indicate the
possibility of photosynthetic sulfate reducing bacteria (Archaea, for example
Sulpholobus) and Cyanobacteria living at that time.1


FOOTNOTES
1. ^ Systematic and Applied Microbiology, Vol 7, pp 178-183 1986
2. ^ Systematic
and Applied Microbiology, Vol 7, pp 180-189 1986
  
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2
184) Amount of Uranium isotope measured in Isua, Greenland Banded Iron
Formation evidence of prokaryote Oxygen photosynthesis.1


FOOTNOTES
1. ^ Earth and Planetary Science Letters Volume 217, Issues 3-4 , 15 January
2004, Pages 237-244U-rich "Archaean sea-floor sediments from Greenland -
indications of >3700 Ma oxygenic photosynthesis" Minik T. Rosing and Robert
Frei
2. ^ Earth and Planetary Science Letters Volume 217, Issues 3-4 , 15 January
2004, Pages 237-244U-rich "Archaean sea-floor sediments from Greenland -
indications of >3700 Ma oxygenic photosynthesis" Minik T. Rosing and Robert
Frei
  
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2
215) C13/C12 ratio of 3700+ MYO sediment in Australia shown to be consistent
with planktonic photosynthesizing organisms.1

FOOTNOTES
1. ^ 13C-Depleted Carbon Microparticles in >3700-Ma Sea-Floor Sedimentary
Rocks from West Greenland
http://www.sciencemag.org/cgi/content/full/283/5402/674 Science 29 January
1999: Vol. 283. no. 5402, pp. 674 - 676 DOI: 10.1126/science.283.5402.674
2. ^ 13C-Depleted Carbon
Microparticles in >3700-Ma Sea-Floor Sedimentary Rocks from West Greenland
http://www.sciencemag.org/cgi/content/full/283/5402/674 Science 29 January
1999: Vol. 283. no. 5402, pp. 674 - 676 DOI: 10.1126/science.283.5402.674
  
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3
78) Genetic comparison shows Archaebacteria (Archaea) Phylum, Korarchaeotes
evolving now.1 2

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).
3. ^ Battistuzzi, Feijao,
Hedges, "A Genomic timescale of prokaryote evolution: insights into the origin
of methanogenesis, phototrophy, and the colonization of land", BMC Evolutionary
Biology, (2004). and image 1

MORE INFO
[1] also see nature v417 n6886
  
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37) The oldest fossil evidence of life yet found. Stromatolites made by
photosynthetic bacteria found in both Warrawoona, Western Australia, and Fig
Tree Group, South Africa.1 2


FOOTNOTES
1. ^ nature feb 6, 1986
2. ^ nature apr 3, 1980
  
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39) Oldest fossils of an organism, thought to be cyanobacteria, found in 3,500
Million Year old chert from South Africa and 3,465 Million year old Apex chert
of north-western Australia.1 2 3 4 5

Oldest fossils of an organism, thought to
be cyanobacteria, found in 3,500 Million Year old chert from South Africa and
3,465 Million year old Apex chert of the Pilbara Supergroup, Warrawoona Group,
northwestern Western Australia.

Some people argue that these are not fossils of bacteria but abiotic material.
Most genetic timelines put the origin of cyanobacteria much later around
2,700mybn.

  
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2
182) Sulphate fossil molecular marker evidence of moderate thermophile sulphur
reducing prokaryotes from North Pole, Australia.1


FOOTNOTES
1. ^
http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v410/n6824/full/
410077a0_fs.html

2. ^
http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v410/n6824/full/
410077a0_fs.html

  
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2
216) Evidence of sulphate reduction by bacteria.1

FOOTNOTES
1. ^ http://www.nature.com/nature/journal/v410/n6824/full/410077a0.html
2. ^ http://www.nature.com/nature/journal/v410/n6824/full/410077a0.html
  
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2
218) Fossil and molecular evidence of photosynthetic, probably anoxygenic,
bacteria that lived in mats in the ocean date to this time.1


FOOTNOTES
1. ^ http://www.nature.com/nature/journal/v431/n7008/full/nature02888.html
2. ^
http://www.nature.com/nature/journal/v431/n7008/full/nature02888.html
  
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190) Fossils from Kromberg Formation, Swaziland System, South Africa.1
FOOTNOTE
S
1. ^
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VBP-42G6M5T-7&_user=4
422&_coverDate=02%2F01%2F2001&_fmt=full&_orig=browse&_cdi=5932&view=c&_acct=C000
059600&_version=1&_urlVersion=0&_userid=4422&md5=d61bf36f008d6b2cba3ba5dbd5a628d
7&ref=full#bib9


MORE INFO
[1] maybe evidence: Nagy, B. and Nagy, L.A., 1969. Early Precambrian
microstructures: possibly the oldest fossils on Earth?. Nature 223, pp.
1226-1229.?
  
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1
71) Budding evolves in prokayotes. Different from binary division, where a cell
is split in half, in budding, a new complete cell is made in the original cell,
and the new cell bursts through the cell wall, the original cell wall must then
be repaired.

Budding is the only other method of reproduction known in prokaryotes
besides binary fission.
The only major difference between prokaryote budding
and binary division are that one or more new cells are completely formed inside
the original cell, where in binary division part of the original cell wall is
used to make the new cell.

In budding, a complete new cell is synthesized from a DNA template, where in
binary division only the DNA is duplicated and more cytoplasm and cell wall is
synthesized. So, budding preserves organelles made by the main DNA template
that cannot duplicate themselves and would not get duplicated or synthesized in
binary division, for example, flagella.

FOOTNOTES
1. ^ Record ID 191. "Universe, life, Science Future". Ted Huntington. (based
on my own estimate based on fossils from id191) (3.4)
  
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191) Fossils from Swartkoppie chert, South Africa are oldest evidence of
procaryotes that reproduce by budding and not binary fission.1


FOOTNOTES
1. ^
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VBP-42G6M5T-7&_user=4
422&_coverDate=02%2F01%2F2001&_fmt=full&_orig=browse&_cdi=5932&view=c&_acct=C000
059600&_version=1&_urlVersion=0&_userid=4422&md5=d61bf36f008d6b2cba3ba5dbd5a628d
7&ref=full#bib9


MORE INFO
[1] (maybe evidence): ZENTRALBLATT FUR BAKTERIOLOGIE MIKROBIOLOGIE UND
HYGIENE I ABTEILUNG Pflug, H.D., 1982. Early diversification of life in the
Archean. Zbl. Bakt. Hyg. I.Abt. Orig. C3, pp. 53-64.?
  
3,235,000,000 YBN
68) Thermophilic prokaryote fossils found in 3235 million year old deep-sea
volcanogenic massive sulphide deposits from the Pilbara Craton of Australia may
be oldest Archaea fossils.1


FOOTNOTES
1. ^ Nature 405, 676 - 679 (08 June 2000); doi:10.1038/35015063 Filamentous
microfossils in a 3,235-million-year-old volcanogenic massive sulphide
deposit BIRGER RASMUSSEN
  
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1
178) Eubacteria Phylum Firmicutes (low G+C {Guanine and Cytosine count} Gram
positive) evolve.1 2 3

Genetic comparison shows Eubacteria Phylum Firmicutes
(low G+C {Guanine and Cytosine count} Gram positive) evolving here.

Firmicutes include the Classes: Bacillus (anthrax), Listeria, Mollicutes, and
Stephylococcus.
Firmicutes may be the first rod shaped bacteria, and first bacteria to have a
gram positive cell wall.
The peptidoglycan layer is thicker in Gram-positive bacteria
(20 to 80 nm) than in Gram-negative bacteria (7 to 8 nm)
Firmicultes form
endospores, and is the only phlyum of bacteria that evolved the ability to
build endospores.

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).

MORE INFO
[1] http://en.wikipedia.org/wiki/Peptidoglycan
[2] firmicutes only bacteria to make endospores
http://en.wikipedia.org/wiki/Endospore
[3] http://en.wikipedia.org/wiki/Firmicutes
  
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2
288) Eubacteria firmicutes evolve the abililty to form endpospores.1
FOOTNOTES
1. ^ "Endospore". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Endospore
2. ^ Ted Huntington, a total guess my friends
  
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1
177) Genetic comparison shows the ancestor of all Proteobacteria (Rickettsia
{mitochondria}, gonorrhoea, Salmonella, E coli) evolving now.1 2 3 4

Proteobact
eria include 5 Classes:
CLASS Alpha Proteobacteria (Rickettsia Prowazekii
{mitochondria/typhus})
CLASS Beta Proteobacteria (Neisseria gonorrhoeae {gonorrhoea})
CLASS Gamma Proteobacteria
(Salmonella and Escherichia coli.)
CLASS Delta Proteobacteria
CLASS Epsilon Proteobacteria

The Proteobacteria are a major group of bacteria. They include a wide variety
of pathogens, such as Escherichia, Salmonella, Vibrio, Helicobacter, and many
other notable genera. Others are free-living, and include many of the bacteria
responsible for nitrogen fixation. The group is defined primarily in terms of
ribosomal RNA (rRNA) sequences, and is named for the Greek god Proteus, who
could change his shape, because of the great diversity of forms found in it.

All Proteobacteria are Gram-negative, with an outer membrane mainly composed of
lipopolysaccharides. Many move about using flagella, but some are non-motile or
rely on bacterial gliding. The last include the myxobacteria, a unique group of
bacteria that can aggregate to form multicellular fruiting bodies. There is
also a wide variety in the types of metabolism. Most members are facultatively
or obligately anaerobic and heterotrophic, but there are numerous exceptions. A
variety of genera, which are not closely related, can photosynthesize. These
are called purple bacteria, referring to their mostly reddish pigmentation.

The delta-proteobacteria Myxobacteria is capable of colonial multicellularity
and some view as possibly being the bacteria that formed the cytoplasm in
eukaryotes.

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).

MORE INFO
[1] multicellularity.
http://www.mansfield.ohio-state.edu/~sabedon/biol3018.htm multicellularity.
Multicellularity.pdf http://en.wikipedia.org/wiki/Escherichia_coli
http://en.wikipedia.org/wiki/Proteobacteria
  
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1
176) Genetic comparison shows Eubacteria Phylum, Planctomycetes
(Planctobacteria) evolving now.1

Planctomycetes are a possible ancestor of all
eukaryotes because the circle of DNA can sometimes be enclosed in a double
membrane.
Planctomycetes is a small phylum with only 4 Genera, require oxygen for growth
(obligately aerobic), are found in fresh and salt water. They reproduce by
budding. They have holdfast (stalk) at the nonreproductive end that helps them
to attach to each other during budding.

The life cycle involves alternation between sessile cells and flagellated
swarmer cells. The sessile cells bud to form the flagellated swarmer cells
which swim for a while before settling down to attach and begin reproduction.

It is also possible, although unlikely, that planctomycetes are descended from
a very early eukaryote that lost the nucleus but retained the cytoplasmic DNA,
since budding may have evolved as a method to duplicate a eukaryote cell from
the nucleus. (ok this is out there...maybe t3)

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).

MORE INFO
[1] s10 http://ijs.sgmjournals.org/cgi/reprint/50/6/1965
[2] http://genomebiology.com/2002/3/6/research/0031
[3] http://en.wikipedia.org/wiki/Planctomycetes
  
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179) Genetic comparison shows Eubacteria Phylum, Actinobacteria (high G+C, Gram
positive) evolving now.1 2 3 4 5

Actinobacteria have 5 Orders:
ORDER Acidimicrobiales
ORDER
Actinobacteriales
ORDER Coriobacteriales
ORDER Rubrobacteriales
ORDER Sphaerobacteriales

Actinobacteria include the causes of tuberculosis (Mycobacteria tuberculosis)
and leprosy (Mycobacteria leprae).

The Actinobacteria or Actinomycetes are a group of Gram-positive bacteria. Most
are found in the soil, and they include some of the most common soil life,
playing an important role in decomposition of organic materials, such as
cellulose and chitin. This replenishes the supply of nutrients in the soil and
is an important part of humus formation. Other Actinobacteria inhabit plants
and animals, including a few pathogens, such as Mycobacterium.

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
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174) Genetic comparison shows Eubacteria Phylum, Spirochaetes (Syphilis, Lyme
disease) evolving now.1

Includes leptospirosis (leptospira), Lyme disease
(Borrelia burgdorferi), and Syphilis (Treponema pallidum).
Spirochaetes only have one
order:
ORDER Spirochaetales

This is when the first spiral shaped bacteria evolve.

The spirochaetes (or spirochetes) are a phylum of distinctive bacteria, which
have long, helically coiled cells. They are distinguished by the presence of
flagella running lengthwise between the cell membrane and cell wall, called
axial filaments. These cause a twisting motion which allows the spirochaete to
move about. Most spirochaetes are free-living and anaerobic, but there are
numerous exceptions.

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).

MORE INFO
[1] Tree of Life. http://tolweb.org/tree/
[2] Richard Dawkins, "The Ancestor's Tale", (Boston,
MA: Houghton Mifflin Company, 2004).
  
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175) Genetic comparison shows Eubacteria Phyla Bacteroidetes and Chlorobi
(green sulphur bacteria) evolving now.1 2

PHYLUM Bacteroidetes
CLASS Bacteroides
ORDER
Bacteroidales
CLASS Flavobacteria
ORDER Flavobacteriales
CLASS Sphingobacteria
ORDER Sphingobacteriales

PHLYUM Chlorobi (Green sulphur)
CLASS Chlorobia
ORDER Chlorobiales3


The phylum Bacteroidetes is composed of three large groups of bacteria. By far,
more is written about and known about the Bacteroides class, than the other
two, the Flavobacteria and the Sphingobacteria classes. They are related by the
similarity in the composition of the small 16S subunit of their ribosomes.
Members of the bacteroides class are human commensals (they benefit but humans
receive no effect) and sometimes pathogens. Members of the other two classes
are rarely pathogenic to humans.

Chlorobi are the "green sulphur bacteria", are a family of phototrophic
(photosynthesizing) bacteria. Green sulfur bacteria are generally nonmotile
(one species has a flagellum), and come in spheres, rods, and spirals. Their
environment must be oxygen-free, and they need light to grow. They engage in
photosynthesis, using bacteriochlorophylls c, d, and e in vesicles called
chlorosomes attached to the membrane. They use sulfide ions as electron donor,
and in the process the sulfide gets oxidized, producing globules of elemental
sulfur outside the cell, which may then be further oxidized. (By contrast, the
photosynthesis in plants uses water as electron donor and produces oxygen.)

A species of green sulfur bacteria has been found living near a black smoker
off the coast of Mexico at a depth of 2,500 meters beneath the surface of the
Pacific Ocean. At this depth, the bacteria, designated GSB1, lives off the dim
glow of the thermal vent since no sunlight can penetrate to that depth.

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).. ^
3. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=563
4. ^ estimate from Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
5. ^ estimate from Battistuzzi, Feijao, Hedges, "A
Genomic timescale of prokaryote evolution: insights into the origin of
methanogenesis, phototrophy, and the colonization of land", BMC Evolutionary
Biology, (2004).

MORE INFO
[1] Tree of Life
[2] http://en.wikipedia.org/wiki/Bacteroidetes
[3] http://en.wikipedia.org/wiki/Chlorobi
  
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217) Genetic comparison shows Eubacteria Phyla Chlamydiae and Verrucomicrobia
evolving now.1

Chlamydiae includes (clamydia, trachoma {Chlamydia
trachomatis}, a form of pneumonia {Chlamydophila pneumoniae}, psittacosis
{Chlamydophila psittaci}.

CLASS Chlamydiae
ORDER Chlamydiales

PHYLA Verrucomicrobia
ORDER Verrucomicrobiales

The Chlamydiae are a group of bacteria, all of which are intracellular
parasites of eukaryotic cells. Most described species infect mammals and birds,
but some have been found in other hosts, such as amoebae.
Chlamydiae have a life-cycle
involving two distinct forms. Infection takes place by means of elementary
bodies (EB), which are metabolically inactive. These are taken up within a
cellular vacuole, where they grow into larger reticulate bodies (RB), which
reproduce. Ultimately new elementary bodies are produced and expelled from the
cell.

Verrucomicrobia is a recently described phylum of bacteria. This phylum
contains only a few described species (Verrucomicrobia spinosum, is an example,
the phylum is named after this). The species identified have been isolated from
fresh water and soil environments and human feces. A number of as-yet
uncultivated species have been identified in association with eukaryotic hosts
including extrusive explosive ectosymbionts of protists and endosymbionts of
nematodes residing in their gametes.

Evidence suggests that verrucomicrobia are abundant within the environment, and
important (especially to soil cultures). This phylum is considered to have two
sister phyla Chlamydiae and Lentisphaera.

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).

MORE INFO
[1] Tree of Life. http://tolweb.org/tree/
[2] Richard Dawkins, "The Ancestor's Tale", (Boston,
MA: Houghton Mifflin Company, 2004).
[3] http://en.wikipedia.org/wiki/Chlamydiae
[4]
http://en.wikipedia.org/wiki/Verrucomicrobia
  
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80) Endocytosis, a process where the cell membrane folds around some molecules
to form a spherical vesicle which enters the cytoplasm, and exocytosis, the
opposite process, where a vesicle combines with a call membrane to empty
molecules outside a cell both evolve in an early eukaryote cell.

Eukaryote cells can now swallow bacteria (phagocytosis) and liquid
(pinocytosis). The cells can then (heterotrophically) use the molecules
injested (for example a bacterium) for copying and to make ATP. This is the
first time one cell can eat a different living cell.

How similar endocytosis is to
conjugation is unknown at this time.

FOOTNOTES
1. ^ guess based on Cav-Smith saving endo before cytoskeleton
  
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207) Cytoskeleton evolves in eukaryote cytoplasm.1 2 3
One theory is that the
cytoskeleton formed from the eukaryote flagella (cilia, undulipodia) tubules.
Cytoskeleto
n is a single body with the endoplasmic reticulum and nuclear membrane?

FOOTNOTES
1. ^ Cavalier-Smith, annals of Botony 2005 vol95 issue 1
  
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60) First eukaryotic cell evolves.1 2 3 4 5 6 7 8 9 10 This cell has a
nucleus, with either single strands or a circle of DNA inside. This is a
single anaerobic cell. This is the first protist.

This cell evolves either by:
1) two or more bacteria joined, one with flagella
(perhaps a eubacteria) formed the nucleus, a second formed the cytoplasm
outside the nucleus, eventually the code to build the entire cell including the
instructions to build the symbiotic captured bacteria was included in the new
nucleus,
2) the nucleus formed as part of the cytoplasm lattice, perhaps the
outer wall folded in on itself creating a double membrane, or a membrane grew
around the DNA (for example like planctobacteria) which provided more
protection for the DNA from the movement and digestive activities of cytoplasm
now without a rigid cell wall,
3) a bacteria with flagella that grew cytoplasm
and a secondary cell wall outside the original cell wall,
4) a virus,
5) a DNA
strand from conjugation with a different prokaryote stored in a vesicle.

There are key features that are different from eukaryotes and prokaryotes:
1) Eukaryotes
have a nucleus, prokaryotes do not.
2) DNA in eukaryotes is in the form of
chromosomes, in prokaryotes the DNA is in a circle.
3) Eukaryotes can do endocytosis,
fold their cell membrane around some external object and injest the object,
prokaryotes can not.
4) Eukaryotes have a membrane lattice of proteins, actin and
myacin, prokaryotes do not.
5) Eukaryotes have an endoplasmic reticulum and golgi
body.
6) Eukaryotes reproduce asexually by dual binary division (both nucleus and
cell divide by binary division), budding, or mitosis, prokaryotes reproduce by
budding or binary division.

If the nucleus is an engulfed prokaryote, this cell inherits the processes of
nuclear DNA duplication and nucleus division (karyokinesis) from prokaryote
binary division. Initially, both the nucleus and cell divide by binary
division.

Support for the nucleus forming from a prokaryote is that chromosomes in
parabasalia and dinoflagellates remain permanently anchored to the nuclear
membrane (envelope?) by the kinetochores, the same way prokaryote DNA anchors
to the cell membrane (wall?) during cell division.

A theory of an archaebacteria (perhaps an eocyte) forming the first eukaryote
nucleus and a gram-negative eubacteria forming the cytoplasm of the first
eukaryote is supported by genetic evidence.

This cell reproduces asexually by either binary fission (both nucleus and
cytoplasm) or budding, or sexually by conjugation or both cell and nuclei fully
merging.

If this cell has chromosomes, this is the first (haploid) organism with
chromosomes.

Perhaps a sperm-like flagellated prokaryote merged with an ovum-like prokaryote
from the same or a different species, perhaps by the ovum opening a pilus and
the sperm-like cell entering the pilus, and once inside opening a pilus through
which the DNA from the two cells could merge. Many diplomonads look like sperm
cells stuck in an ovum, with the still flagellated sperm forming the nucleus,
and some diplomonads, for example, the oxymonad, Saccinobaculus reproduce
sexually.

An important evolutionary step had to evolve here, and that is the evolution of
the prokaryote binary division system: 1) duplicating DNA in the cytoplasm, 2)
separating the two copies of DNA, and 3) the division of cytoplasm into two
cells to an adapted process of eukaryote cell division: 1) duplicating DNA in
the nucleus, 2) separating the DNA in the nucleus, 3) dividing the nucleus into
two nuclei, 4) separating the two nuclei, and then 5) dividing the cytoplasm
into two cells.

It appears in early eukaryote nuclei (as seen in closed mitosis, where the
nuclear membrane persistes through mitosis) that the nuclei divide by a process
similar to binary division (as opposed to budding), which adds to the support
for the first nucleus being a prokaryote and continuing to divide by binary
division.

Most people accept that the centrioles from which grow the microtubule spindles
that pull apart chromosomes in mitosis, evolved from the base pairs which
originally were, and on some species still are, connected to a cilium.

Perhaps there are some eukaryote nuclei that duplicate by budding, although
this has never been found to my knowledge. If ever found, that would imply
that budding evolved before the first eukaryote, but could have possibly
evolved after by simply dropping the instructions to copy anything other than
the nucleus. Binary cell division in the most basic form only synthesizes more
cytoplasm and cell wall, where budding reproduces the entire body plan of a
cell (or nucleus in this case).

FOOTNOTES
1. ^ Nature 396, 109 - 110 (12 November 1998); doi:10.1038/24030 Rickettsia,
typhus and the mitochondrial connection MICHAEL W. GRAY
  
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65) DNA in the nucleus changes from a single circular chromosome to linear
chromosomes.1 2 3 4

Possibly the prokaryote ancestor of the first eukaryote had linear chromosomes
since some prokaryotes (although very few) are known to have linear chromosomes
instead of or in addition to a single circular chromosome.

Perhaps a DNA strand entered a
cell by conjugation, the circle of DNA was cut to insert the new DNA (plasmid),
but the new DNA strand was not sewn back into the original strand of DNA
creating two strands of DNA which eventually evolved into the first 2
chromosomes.

Perhaps the first eukaryote nucleus was a virus, many of which have linear
chromosomes.

This includes the evolution of histones, proteins which are packed in between
nucleotides in each chromosome.

Presumably DNA duplication (sythesis) of chromosomes (in the nucleus) is
initially identical to DNA duplication of DNA strands or circular DNA.

Some prokaryotes do not have just one circle of DNA.5 Brucella melitensis
has 2 circlular chromosomes. Agrobacterium tumefaciens has a circular and a
linear chromosome. Streptomyces griseus can have one linear chromosome.
Borrelia burgdorferi contains a linear chromosome and a number of variable
circular and linear plasmids. Most eukaryote orgenelles have a single circular
chromosome except for the mitochondria of most cnidarians and some other forms
which have linear chromosomes.

FOOTNOTES
1. ^ not all prokaryotes has circle of
DNA: http://arjournals.annualreviews.org/doi/full/10.1146/annurev.ecolsys.28.1.
391;jsessionid=npo4ogeI2anbnHbeKO

2. ^ Jumas-Bilak E, Maugard C, Michaux-Charachon S, Allardet-Servent A, Perrin
A, et al. 1995. Study of the organization of the genomes of Escherichia coli,
Brucella melitensis and Agrobacterium tumefaciens by insertion of a unique
restriction site. Microbiology 141:2425-32 (Medline)
3. ^ Lezhava A, Kameoka D, Sugino H,
Goshi K, Shinkawa H, et al. 1997. Chromosomal deletions in Streptomyces griseus
that remove the afsA locus. Mol. Gen. Genet. 253:478-83
4. ^ Marconi RT, Casjens S,
Munderloh UG, Samuels DS. 1996. Analysis of linear plasmid dimers in Borrelia
burgdorferi sensu lato isolates: implications concerning the potential
mechanisms of linear plasmid replication. J. Bact. 178:3357-61
5. ^ not all prokaryotes has
circle of
DNA: http://arjournals.annualreviews.org/doi/full/10.1146/annurev.ecolsys.28.1.
391;jsessionid=npo4ogeI2anbnHbeKO

6. ^ Ted Huntington, my guess due to absence of published info
  
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208) A eukaryote flagellum (cilium, undulipodium) evolves on early single cell
eukaryotes.

The eukaryote cilia (flagella, undulipodia) may evolve from a prokaryote
flagella connected to the nucleus, from the cytoskeleten, or a symbiotic
prokaryote.

Cilia and eukaryote flagella are structurally the same, but have minor
functional differences. Cilia are a special class of eukaryote flagella.
The
eukarote flagellum is different from prokayote flagellum. The prokaryote
flagallum is a solid structures, made of the protein flagellin, which protrudes
through the plasma membrane.

The eukaryote flagellum (and cilium) contains a "9 plus 2 array", 9
microtubules in a circle with 2 microtubules in the center. Some people think
that the eukaryote flagella and cilia should be called "undulipodia".

In some species the spindles used in mitosis connect to the bases of the
eukaryote cilia (undulipodia), which leads some people to think that the
spindles of mitosis may have evolved from the eukaryote cilia.

Some people think that the eukaryote cilium (flagellum, undulipodia) was a
spirochete (prokaryote) that formed a symbiotic relationship with a eukaryote
host, whose DNA was transfered to the host nucleus. Other possibilities are
that the eukaryote flagellum evolved from prokaryote flagellum, or simply
evolved over time through natural selection.

The eukaryote flagellum protein "tubulin" is thought to be related to a
bacterial replication/cytoskeletal protein "FtsZ" found in some archaebacteria
(archaea).

What method of reproduction this first nucleated cell used is a great mystery.
Among the choices are binary division, budding, or mitosis. My own feeling is
that budding or dual binary division (both nucleus and cytoplasm) was how this
cell initially copied.



  
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291) For the first time, a cell is not constantly synthesizing DNA and then
having a division period (as is the case for all known prokaryotes), but this
cell has a period in between cell division and DNA synthesis where DNA
synthesis is not performed. Later some cells develop a stage after synthesis
and before cell division.1

For the first time, a cell is not constantly
synthesizing DNA (S) and then having a division period (D) (as is the case for
all known prokaryotes), but this cell has a period in between cell division and
DNA synthesis where DNA synthesis is not performed (G1) . Later some cells
develop a stage after synthesis and before cell division (G2).

  
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302) If the first eukaryote nucleus was a prokaryote, synchronized duplication
and division of organelle-nucleus and cytoplasm of early eukaryote cell
evolves. Before this, eukaryote cell division usually results in one cell with
no organelle-nuclei and a second cell with 2 organelle-nuclei. Perhaps the
organelle-nuclei attach to the outer cell membrane in the same way the
cytoplasmic DNA do, which allows new cytoplasm growth to separate the two
organelle-nucleus in addition to the cytoplasmic DNA.1 2

Or perhaps the first
system of organized nuclei separation originated with the organelle-nucleus
flagella microtubules grewing into the cytoskeleton, and organized system
spindles and mitosis.

If the nuclear membrane was formed around the DNA within a prokaryote, then
binary division had to adapt to separate the duplicated DNA within the
proto-nucleus (not within the entire cell) which may have been very simple to
evolve. If the cytoplasm grew outside the cell wall of a prokaryote, binary
division would have to adapt to separate that external cytoplasm.

FOOTNOTES
1. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989).
  
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72) Mitosis, asexual copying of a haploid (single set of chomosomes) eukaryote
nucleus, evolves in eukaryotes. Before mitosis, there is a synthesis stage
where DNA in the form of chromosomes are duplicated in the nucleus before the
nucleus and cell divide.1 2

explain basic process of mitosis:
prophase, metaphase,
anaphase, telophase

Presumably no prokaryotes have ever reproduced through mitosis. Only
eukaryotes reproduce asexually using mitosis.

Most people accept that some protists were sexual and later lost that ability.
But the majority view now is that the first eukaryotes were asexual, and that
some protists still living now have never had sexual ability.

Because mitosis is complex and similar in detail in all species that do
mitosis, people think that mitosis only evolved once, and was inherited by all
species that do mitosis.

The major differences between this new method of copying, mitosis and the older
method, binary fission (add budding?) are:
1) In mitosis, microtubule spindles
attach to the kinetochore (the protein structure in eukaryotes which assembles
on the centromere and links the chromosome to microtubule polymers from the
mitotic spindle during mitosis) and pull apart the two DNA copies, where in
binary fission the DNA (single chromosome) attaches to a part of the cytoplasm
which pulls apart the two cells.
2) Chromosomes (linear pieces of DNA), not a circle
of DNA is being copied.

People speculate that early mitosis had spindles outside the nucleus, with
chromosomes fastened to the nuclear membrane, as can still be seen in
parabasalia and dinoflagellates, which appear to have primitive nuclei.

In more ancient species the nuclear membrane persists through mitosis (closed
mitosis), but in more recent species, like metazoa, land plants, and many kinds
of protists, the nuclear membrane disintegrates before mitosis and is rebuilt
after (open mitosis).

Most people think that extranuclear spindles (spindles that originate outside
of the nucleus) and closed mitosis evolved first. Only later did pleuromitosis
(spindles rotate 90 degrees, nucleus can be semi-open, or closed) and then
orthomitosis (spindles are on both sides of nucleus and separate chromosomes in
a straight line, nucleus can be open, semi-open or closed) evolve in later
eukaryotes.

  
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303) Cytoplasmic cell fusion and division evolves. Two eukaryote cells can
merge into one cell with 2 nuclei and then divide back into single 1 nucleus
cells.



  
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1 2
73) Sex (cell and genetic fusion, syngamy, gametogamy) evolves in protists.
Haploid (1 set of chromosomes) eukaryote cells merge and then their nuclei
merge (karyogamy) to form the first diploid (2 sets of chromosomes) cells (the
first zygote).1 2

This fusion of 2 haploid cells results in the first diploid single-celled
organism, which then immediately divides (both nucleus and cytoplasm by
single-division meiosis) back to two haploid cells.

Possibly first, only cytoplasmic merging happened with nuclear merging
(karyogamy) and nuclear division (karyokinesis) evolving later.
Now, two cells with
different DNA can mix providing more chance of variety/mutation. Two
chromosome sets provides a backup copy of important genes (sequences that code
for proteins, or nucleic acids) that might be lost with only a set of single
chromosomes.

The life cycle of future organisms will now have two phases, a gamophase (from
n to 2n (until syngamy3 )), and zygophase (from 2n to n (until meiosis4 )).
Gamoid cells are not haploid in polyploid organisms.

Potentially sexual cell and genetic
fusion is what made the first eukaryote cell, and sex in protists may be
directly descended from conjugation in prokaryotes, in other words not evolved
from a different method independently of conjugation, because some metamonads,
for example Saccinobaculus reproduce sexually, and look very much like a
prokaryote sperm cell which formed the nucleus captured in an ovum cell.

For sexual species there are 3 basic life cycles:
1) Haploid (Haplontic) life cycle:
zygotic meiosis. Life as haploid cells, cell division immediately after
creation of zygote from fusion. (All fungi, Some green algae, Many protozoa)
2) Diploid
(Diplontic) life cycle: gametic meiosis. Instead of immediate cell division,
zygote reproduces by mitosis. Haploid gametes never copy by mitosis. (animals,
some brown algae)
3) Haplodiploid (Haplodiplontic, Diplohaplontic, Diplobiontic) life
cycle: sporic meiosis. Diploid cell (sporocyte) meiosis results in 2 haploid
sporophytes (gamonts), not 2 haploid gametes. These haploid cells then
differentiate? or mitosis? to form haploid gametes. Haplodiplontic organisms
have alternation of generations, one generation involves diploid
spore-producing single or multicellular sporophytes (makes spores) and the
other generation involves haploid single or multicellular gamete-producing
multicellular gametophytes (makes gametes). Pants and many algae have this
haplodiplontic life cycle.

These first sexual cells are haplontic, with zygotic meiosis; they reproduce
asexually through mitosis as haploid cells, fusing to a diploid cell without
mitosis, then dividing back into haploid cells.

An important evolutionary step evolves here in that now two cells can
completely merge into one cell. This merge not only includes their nuclei, but
also their cytoplasm (althought the DNA do not merge). Before now, as far as
has ever been observed, no two cells have ever completely merged, although,
through conjugation some prokaryotes have been observed to exchange DNA.

This marks the beginning of the "haplonic lifestyle" with "zygotic meosis",
where the organism is haploid until cell fusion which is immediately followed
by (one-step) meiosis of the zygote, after which the haploid cells continues to
reproduce through mitosis.

Possibly the first sexual organism merged through a form of "autogamy" (both
haploid gametes originate from the same individual, the opposite of "allogamy"
where the gametes originate from different individuals). Some species
reproduce by a form of autogamy (intracellular autogamy), where nuclei (also
called pronuclei) divide and then merge within the same cell before the entire
cell divides. Some metamonads (earliest still living eukaryotes), like
Oxymonas and Saccinobaculus can reproduce asexually by mitosis, but also can
reproduce sexually using this form of autogamy. This may be evidence that some
prokaryote could also merge two entire cells (if the eukaryote nucleus was a
prokaryote). Perhaps prokaryotes evolved full cellular fusion before the first
eukaryote. If that is true, then this initial form of nuclei dividing and
merging (intracellular autogamy) may have existed for some time before full
eukaryote cell merging and synchronized eukayote nucleus and cytoplasm division
evolved. It is difficult to see what selective advantage autogamy could
possibly have since no new DNA is ever introduced into the next generation of
organism, as opposed to "allogamy", where DNA from different individuals is
merged, and which has a clear selective advantage. So perhaps autogamy evolved
after allogamy, although to me it appears that allogamy is more complex than
autogamy, and autogamy would be a perfect starting step to develop the needed
proteins and processes for the more complicated allogamy (autogamy only
involves the duplication and merging of two nuclei, where allogamy involves the
merging of the cell walls, and cytoplasm in addition to the two nuclei.)

This is the beginning of the label "gamete" for haploid cells that can merge to
form a diploid zygote. In addition, the label "gametocyte" or "gamont" is any
polyploid cell that divides (meiosis) into haploid gamete cells which can merge
to form a zygote.

FOOTNOTES
1. ^ Sir Gavin De Beer, "Atlas of Evolution", (London: Nelson, 1964).
2. ^ estimate
based on diplomonads having sex repro, and origin of euk being (is now)
  
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206) Meiosis (one-step meiosis, one DNA duplication and a cell division of a
diploid cell into 2 haploid cells) evolves.1 2

detail one-step meiosis:

The is no DNA crossover or chiasma formation in one-division meiosis,
apparently because either duplication of chromosomes or separation of
chromatids does not occurred.

As far as I know, mitosis and one-step meiosis are the same with the only
exceptions that 1) in meiosis two haploid cells join before cell division, and
2) in mitosis the DNA is duplicated before cell division, but in meiosis the
DNA is not duplicated before cell division.

Meiosis can be one step (one DNA duplication and then one cell division) or two
step (two DNA duplications and then two divisions). Probably one step meosis
evolved first and two step meiosis later.

Meiosis can only function on cells with two or more sets of chromosomes.

  
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299) Duplication of diploid DNA (after 2 haploid cells fuse) evolves.
This is required
for diploid mitosis.

Duplication of diploid DNA may be very similar to duplication of haploid DNA.

Initially perhaps the diploid DNA duplicated, but still divided in one-division
meiosis.



  
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210) Mitosis of diploid cells evolves. This begins the "diplontic" life cycle
(with gametic meiosis), where diploid cells (a zygote) can copy asexually
through mitosis after merging. This organism, when haploid, cannot do mitosis
(presumably haploid gamete mitosis will evolve much later in brown algae), and
this is still true in all descendents (including humans) of this single celled
organism.

The proteins and mechanism of mitosis of diploid cells is probably very
similar to mitosis of haploid cells. The most primitive organisms still alive
that are diplontic are the metamonads (e.g. Oxymonads: Notila, Hypermastigotes:
Urinympha, Macrospironympha, Rhynchonympha).



  
2,704,000,000 YBN
296) The origin of gender evolves: sex (cell and nucleus fusion) between two
isogamous (same size) gametes but which have 2 different (+ and -) forms
(genders).1

Perhaps the invention of two different genders originated when a
flagellated cell (or nucleus) divided by binary division and only one half of
the two new cells retained the flagellum. Then to differentiate the two cells
even more, but still keep the same DNA template, different proteins could be
weighted on one half of the cell during division to activate various operons in
one gender but not the other once the two DNA pairs are separated.

Perhaps sex where the gametes are the same size but cannot merge themselves
should be called "specific" or "gendered" isogamy, and where any two same sized
gametes can merge called "nonspecific" or "nongendered" isogamy.

  
2,703,000,000 YBN
297) Sex (cell and nucleus fusion) between two different size gamete cells
(heterogamy or anisogamy) evolves in protists.1

Some species are heterogamous
but two of the same sized (gender) gametes can fuse to form a zygote.

  
2,702,000,000 YBN
298) Sex (cell and nucleus fusion) between one flagellated gamete and an
unflagellated gamete (oogamy, a form of heterogamy) evolves in protists.1

FOOTN
OTES
1. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989).
  
2,700,000,000 YBN
62) Oldest steranes (formed from sterols, molecules made by mitochondria in
eukaryotes) found in northwestern Australia.1 2


FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^ Science,
Vol 285, Issue 5430, 1033-1036 , 13 August 1999 Archean Molecular Fossils and
the Early Rise of Eukaryotes Jochen J. Brocks, 1,2* Graham A. Logan, 2 Roger
Buick, 1 Roger E. Summons 2
  
2,700,000,000 YBN
192) Fossils from the Bulawaya stromatolite, Zimbabwe.1
FOOTNOTES
1. ^
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VBP-42G6M5T-7&_user=4
422&_coverDate=02%2F01%2F2001&_fmt=full&_orig=browse&_cdi=5932&view=c&_acct=C000
059600&_version=1&_urlVersion=0&_userid=4422&md5=d61bf36f008d6b2cba3ba5dbd5a628d
7&ref=full#bib9
Nagy, L.A. and Zumberge, J.E., 1976. Fossil microorganisms
from the approximately 2800-2500 million-year-old Bulawaya stromatolites:
Application of ultramicrochemical analyses. Proc. Natl. Acad. Sci. Wash. 73,
pp. 2973-2976.
  
2,700,000,000 YBN
214) Biomarkers characteristic of cyanobacteria, 2alpha -methylhopanes,
indicate that oxygenic photosynthesis evolved well before the atmosphere became
oxidizing.1

FOOTNOTES
1. ^ Science, Vol 285, Issue 5430, 1033-1036 , 13 August 1999, Archean
Molecular Fossils and the Early Rise of Eukaryotes Jochen J. Brocks, 1,2*
Graham A. Logan, 2 Roger Buick, 1 Roger E. Summons 2
  
2,692,000,000 YBN
300) Diploid cell fusion (Gamontogamy) evolves.1 2 3 4
Only a few species
exhibit this property (e.g. the Oxymonad Notilla, Diatoms, Dasicladales
{Acetabularia}, in many foraminiferans, and in gregarines).

Gamontogamy may have evolved into two-step meiosis.

The vast majority of eukaryotes living now that reproduce sexually fuse haploid
cells. All "gametes" are haploid cells that can merge, diploid cells that can
merge are gamonts. Gamonts (Meiocytes) are cells that produce gametes.

In theory this should be very similar if not exactly like haploid cell fusion,
so perhaps this is not a major evolutionary step.

  
2,690,000,000 YBN
295) Meiosis (two step meiosis, two cell divisions with no stage in between
which result in one diplid cell dividing into four haploid cells) evolves.1

Mei
osis and mitosis are similar in being process of nucleus and cell division, but
are different.
Differences between meiosis and mitosis:
1) At least one crossover per
homologous pair happens in 2 step meiosis but crossover usually does not happen
in mitosis.
2) Two step meiosis involves cell divisions that happen one after the other,
where mitosis only happens after one DNA duplication (there are never 2 mitoses
together without a DNA duplication between them to my knowledge).

The cell division in two step meiosis that involves a separation of sister
chromatids (not homologous chromosome pairs) is basically identical to mitosis.
For two step meiosis, this is the second nucleus and cell division.

  
2,650,000,000 YBN
2
170) First bacteria live on land.1

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).
2. ^ Battistuzzi, Feijao,
Hedges, "A Genomic timescale of prokaryote evolution: insights into the origin
of methanogenesis, phototrophy, and the colonization of land", BMC Evolutionary
Biology, (2004). (2600-2700my)
  
2,558,000,000 YBN
1
171) Phylum Deinococcus-Thermus (Thermus Aquaticus {used in PCR}, Deinococcus
radiodurans {can survive long exposure to radiation}) evolve now.1

PHYLUM
Deinococcus-Thermus
CLASS Deinococci
ORDER Deinococcales
ORDER Thermales

The Deinococcus-Thermus are a small group of bacteria comprised of cocci highly
resistant to environmental hazards. There are two main groups. The
Deinococcales include a single genus, Deinococcus, with several species that
are resistant to radiation; they have become famous for their ability to eat
nuclear waste and other toxic materials, survive in the vacuum of space and
survive extremes of heat and cold. The Thermales include several genera
resistant to heat. Thermus aquaticus was important in the development of the
polymerase chain reaction where repeated cycles of heating DNA to near boiling
make it advantageous to use a thermo-stable DNA polymerase enzyme. These
bacteria have thick cell walls that give them gram-positive stains, but they
include a second membrane and so are closer in structure to those of
gram-negative bacteria.

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).

MORE INFO
[1] Tree of Life. http://tolweb.org/tree/
[2] Richard Dawkins, "The Ancestor's Tale", (Boston,
MA: Houghton Mifflin Company, 2004).
  
2,558,000,000 YBN
1 2
172) Genetic comparison shows Eubacteria phylum, Cyanobacteria (ancestor of all
eukaryote chloroplasts {plastids}) evolving now. There is a conflict between
the interpretation of the geological and the genetic evidence as to if oxygen
photosynthesis and cyanobacteria evolved earlier around 3800mybn or here at
2500mybn.1 2

Cyanobacteria get their energy from photosythesis.

Cyanobacteria include unicellular, colonial, and filamentous forms. Some
filamentous cyanophytes form differentiated cells, called heterocysts, that are
specialized for nitrogen fixation, and resting or spore cells called akinetes.
Each individual cell typically has a thick, gelatinous cell wall, which stains
gram-negative. The cyanophytes lack flagella, but may move about by gliding
along surfaces. Most are found in fresh water, while others are marine, occur
in damp soil, or even temporarily moistened rocks in deserts. A few are
endosymbionts in lichens, plants, various protists, or sponges and provide
energy for the host.

Chloroplasts found in eukaryotes (algae and higher plants) most likely
represent reduced endosymbiotic cyanobacteria. This endosymbiotic theory is
supported by various structural and genetic similarities. Primary chloroplasts
are found among the green plants, where they contain chlorophyll b, and among
the red algae and glaucophytes, where they contain phycobilins. It now appears
that these chloroplasts probably had a single origin. Other algae likely took
their chloroplasts from these forms by secondary endosymbiosis or ingestion.

tenative:
CLASS Chroobacteria
CLASS Hormogoneae
CLASS Gloeobacteria

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).
2. ^ S. Blair Hedges and
Sudhir Kumar, "Genomic clocks and evolutionary timescales", Trends in
Genetics Volume 19, Issue 4 , April 2003, Pages 200-206, (2003).

MORE INFO
[1] Tree of Life. http://tolweb.org/tree/
[2] Richard Dawkins, "The Ancestor's Tale", (Boston,
MA: Houghton Mifflin Company, 2004).
[3] Journal of Molecular Evolution Publisher:
Springer-Verlag New York ISSN: 0022-2844 (Paper) 1432-1432 (Online) Issue:
Volume 42, Number 2 Date: February 1996 Pages: 194 - 200
[4] Phylogenetic
Relationships of Nonaxenic Filamentous Cyanobacterial Strains Based on 16S rRNA
Sequence Analysis jme_42_2_1996.pdf
[5] http://en.wikipedia.org/wiki/Cyanobacteria
  
2,558,000,000 YBN
3
315) Phylum Chloroflexi, (Green Non-Sulphur) evolve now.1
PHYLUM Chloroflexi

CLASS Chloroflexi
CLASS Thermomicrobia2

The Chloroflexi are a group of bacteria that produce ATP through
photosynthesis. They make up the bulk of the green non-sulfur bacteria, though
some are classified separately in the Phylum Thermomicrobia. They are named for
their green pigment, usually found in photosynthetic bodies called
chlorosomes.

Chloroflexi are typically filamentous, and can move about through bacterial
gliding. They are facultatively aerobic, but do not produce oxygen during
photosynthesis, and have a different method of carbon fixation than other
photosynthetic bacteria. Phylogenetic trees indicate that they had a separate
origin.

FOOTNOTES
1. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of prokaryote
evolution: insights into the origin of methanogenesis, phototrophy, and the
colonization of land", BMC Evolutionary Biology, (2004).
2. ^ "Chloroflexi". Wikipedia.
Wikipedia, 2008. http://en.wikipedia.org/wiki/Chloroflexi
3. ^ Battistuzzi, Feijao, Hedges, "A Genomic timescale of
prokaryote evolution: insights into the origin of methanogenesis, phototrophy,
and the colonization of land", BMC Evolutionary Biology, (2004).

MORE INFO
[1] Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
[2] Tree of Life http://tolweb.org/tree/
  
2,500,000,000 YBN
52) End Archean Era, Start Proterozoic Era.1 2

FOOTNOTES
1. ^ The geological Society of America ucmp.berkeley.edu
2. ^ Richard Cowen, "History of Life",
(Malden, MA: Blackwell, 2005).
  
2,500,000,000 YBN
56) Banded Iron Formations start to appear in many places.1 2

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^
greenspirit.uk
  
2,400,000,000 YBN
59) Very large ice age that lasts 200 million years starts now.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
2,335,000,000 YBN
1
290) The nucleolus, a sphere in the nucleus that makes ribosomes, evolves.1
In
some eukaryotes (thought to be more ancient), the nucleolus just divides during
mitosis, but in other eukaryotes the mitosis is dissolved and rebuilt after
nuclear division.

In euglenids, kinetoplastids, dinoflagellates, some amoebae and some
coccidians, the nucleolus remains visible throughout mitosis and divides into
two, but in the majority of groups the nucleolus dissapears and reforms at
telophase. That the nucleolus can divide by itself suggests that it was once a
free living cell.

FOOTNOTES
1. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989).: p48 nucleolus divides
  
2,330,000,000 YBN
198) Rough and smooth endoplasmic reticulum evolves in eukaryote cell.
Rough and
smooth endoplasmic reticulum evolves in eukaryote cell.

The rough ER manufactures and transports proteins destined for membranes and
secretion. It synthesizes membrane, organellar, and excreted proteins. Minutes
after proteins are synthesized most of them leave to the Golgi apparatus within
vesicles. The rough ER also modifies, folds, and controls the quality of
proteins.

The smooth ER has functions in several metabolic processes. It takes part in
the synthesis of various lipids (e.g., for building membranes such as
phospholipids), fatty acids and steroids (e.g., hormones), and also plays an
important role in carbohydrate metabolism, detoxification of the cell (enzymes
in the smooth ER detoxify chemicals), and calcium storage. It also is a large
transporter of nutrient found in each cell.



  
2,325,000,000 YBN
199) Golgi Body (Golgi Apparatus, dictyosome) evolves in eukaryote cell.
The primary
function of the Golgi apparatus is to process proteins targeted to the plasma
membrane, lysosomes or endosomes, and those that will be formed from the cell,
and sort them within vesicles. It functions as a central delivery system for
the cell.

Most of the transport vesicles that leave the endoplasmic reticulum (ER),
specifically rough ER, are transported to the Golgi apparatus, where they are
modified, sorted, and shipped towards their final destination. The Golgi
apparatus is present in most eukaryotic cells, but tends to be more prominent
where there are many substances, such as proteins, being secreted. For example,
plasma B cells, the antibody-secreting cells of the immune system, have
prominent Golgi complexes.



  
2,310,000,000 YBN
200) The golgi body in eukaryote cells makes lysosomes which fuse with
endosomes. The various molecules in lysosomes digest the contents of the
endosome, which then exits the cell as waste.




  
2,305,000,000 YBN
63) A parasitic bacterium, a bacterium that can only live in other bacteria,
closely related to Rickettsia prowazekii, an aerobic alpha-proteobacteria that
causes louse-borne typhus, enters an early eukaryote cell. As time continues a
symbiotic relationship evolves, where the Rickettsia forms the mitochondria,
organelles of every euokaryote cell. The mitochondria perform the Acid Citric
Cycle (Krebs Cycle), using oxygen to breakdown glucose into CO2 and H2O, and
provide up 38 ATP molecules. Mitochondria reproduce by themselves, and are not
created by the DNA in the cell nucleus. As time continues some of the DNA from
the mitochondria merges with the cell nucleus DNA. Mitochondria produce sterol
used to make the eukaryote cell wall flexible. Because mitochondria need
Oxygen, but the level of oxygen is very low on earth, oxygen may be provided by
photosynthesizing cyanobacteria living near these cells.

All eukaryotes alive today either have mitochondria except the amitochondriate
excavates (metamonads), the most ancient of the eukaryotes alive today. That
parabasalids have hydrogenosomes, anaerobic organelles that seem to have
evolved from mitochondria, many people think amitochondriate species lost their
mitochondria over time.1

This changes the eukaryote cell from an anaerobic to
aerobic unicellular organism.
This early mitochondria may have "tubular christae".
Perhaps there was
a period of time where a system evolved to make sure both halves received
mitochondria during cell division.

Protists with discoidal mitochondrial cristea will later evolve from the Bikont
tubular mitochondrial christae branch.

For the most part:
1) Excavates, Amoebozoa, and Chromealveolates have or had tubular
christae,
2) Discicristata (Euglenozoa) have discoidal christae.
3) Cryptomonads,
Glaucophytes, Red Algae, Green Algae, Plants, Fungi, Animals all have flat
christae.

From this point on, all eukaryotes will need Oxygen to use mitochondria and
receive the ATP made by mitochondria. 2



FOOTNOTES
1. ^ http://comenius.susqu.edu/BI/202/Protists/EUKARYA-DOMAIN.htm
2. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
2,303,000,000 YBN
4
203) Bikonts (two cilia) evolve from Unikonts (one cilium). Bikonts (also
called anterokonts for having anterior {forward facing} cilia) will evolve into
the vast majority of the Protist and all of the Plant Kingdoms. The Unikonts
will evolve into the ameobozoa (tenatively), and the opisthokonts (ancestrally
posterior cilium) which include the entire Fungi and Animal Kingdoms.1 2 3


FOOTNOTES
1. ^ Nucleic Acids Research Pages 865-878 v26 4 865 MW Gray, BF Lang, R
Cedergren, GB Golding, C Lemieux, D Sankoff, M Turmel, N Brossard, E Delage, TG
Littlejohn, I Plante, P Rioux, D Saint-Louis, Y Zhu, and G Burger
2. ^ Genome
structure and gene content in protist mitochondrial DNAs J Mol Evol (2003)
56:540 563, 2003 56:540-563 Cavalier-Smith Journal of Molecular
Evolution Phylogeny of Choanozoa, Apusozoa, and Other Protozoa and Early
Eukaryote Megaevolution Thomas Cavalier-Smith, Ema E.-Y. Chao
3. ^ Cav-Smith science
vol297 issue 5578 07-05-2002
4. ^ S. Blair Hedges, "The Origin and Evolution of Model
Organisms", Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).

MORE INFO
[1] THOMAS CAVALIER-SMITH, "Economy, Speed and Size Matter: Evolutionary
Forces Driving Nuclear Genome Miniaturization and Expansion", * Oxford
Journals * Life Sciences * Annals of Botany * Volume 95, Number
1 *, (2005).
[2] Thomas Cavalier-Smith and Ema E. -Y. Chao, "Phylogeny of
Choanozoa, Apusozoa, and Other Protozoa and Early Eukaryote Megaevolution",
Springer New York, (2003).
[3] Michael W. Gray, B. Franz Lang, Robert Cedergren, G.
Brian Golding, Claude Lemieux, David San, "Genome structure and gene content in
protist mitochondrial DNAs", Oxford Journals, (1997).
  
2,300,000,000 YBN
47) Most recent evidence of uraninite, a mineral that cannot exist for much
time if exposed to oxygen, indicating that free oxygen is accumulating in the
air of earth for the first time.1


FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
2,300,000,000 YBN
48) Oldest Red Beds, iron oxide formed on land, begin here and are evidence of
more free oxygen in the air of earth.1 2


FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^
http://www.es.ucsc.edu/~pkoch/lectures/lecture5.html
  
2,300,000,000 YBN
1 2 3
219) Genetic comparison shows the oldest line of eukaryotes still in existence,
the oldest living protists, in the Phylum "Metamonada" (Excavates) originating
now. 1 2 3 This is where the eukaryote line is created and separates from the
archaebacteria (archaea) line. Most of these species have an excavated ventral
feeding groove, and all lack mitochondria. Mitochondria are thought to have
been lost secondarily, although this is not certain.

PHYLUM Metamonada
ORDER Carpediemondida
ORDER
Diplomonadida
ORDER Retortamonadida
CLASS Parabasalia
ORDER Trichomonadida
ORDER Hypermastigida
CLASS Anaeromonada
ORDER Oxymonadida
ORDER
Trimastigida
Includes Diplomonad "Giardia", and Parabasalid "Trichomonas vaginalis".
The trophozoite
form of Giardia does age and die.
Most Metamonads reproduce asexually through closed
(the nuclear membrane does not dissolve during mitosis) mitosis (and involves
an external spindle? is pluromitosis?), but some species are "faculatively
sexual" (can reproduce sexually in addition to asexually). So already by the
time of these most ancient of the now living eukaryotes, sex had evolved.
eat
bacteria?

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ S. Blair Hedges, "The Origin and
Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849;
doi:10.1038/nrg929, (2002).
  
2,000,000,000 YBN
1 2 3 4
293) Genetic comparison shows the the Eukaryote Phylum "Loukozoa" (Jakobea and
Malawimonadea) originating now. These species have mitochondria with tubular
cristae, and are the most ancient species that still have mitochondria.1 2 3 4


This species is the most ancient known species to have a shell. This first
hard shells (lorika) made of calcium carbonate (Calcite CaCO3), plates of
silica (SiO2), or carbon-based molecules evolve around the single-celled
species living in the ocean. 5

Perhaps this shell served to protect the cell from external damage from being
eaten by other eukaryotes (zooplankton), infection by bacteria or viruses,
control of buoyancy, to filter UV light, against damage by non-living sources.
6

Jakobids and Malawimonads are also grouped as Excavates because they have a
ventral feeding groove.

Jakobids are flagellates with two flagella located at the anterior end of a
ventral feeding groove (i.e., are excavate), with mitochondria, freely swimming
or loricate (with protective shell).

Flagellar apparatus with two basal bodies giving rise to two major microtubular
roots, which support the margins of the ventral groove. Other cytoskeletal
microtubules arise directly or indirectly from the basal bodies, no
extrusomes.

Jakobids have tubular mitochondrial cristae (transforming to flat cristae in
Jakoba libera). (1) This indicates that flat evolved from tubular cristae.

PHYLUM Loukozoa
ORDER Jakobida
ORDER Malawimonadida

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ S. Blair Hedges, "The Origin and
Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849;
doi:10.1038/nrg929, (2002).
4. ^ estimate from S. L. Baldauf, "The Deep Roots of
Eukaryotes", Science 13 June 2003: Vol. 300. no. 5626, pp. 1703 - 1706 DOI:
10.1126/science.1085544, (2003).
  
1,990,000,000 YBN
202) Eukaryotes with discoidal cristae mitochondria split from the tubular
christae line.1

This is the origin of the Discicristata: species that have discoid
mitochondrial cristae and, in some cases, a deep (excavated) ventral feeding
groove.2

The Discicristata are Acrasid slime molds, vahlkampfiid amoebas,
euglenoids, trypanosomes, and leishmanias.

  
1,990,000,000 YBN
301) Haplodiplontic (Diplohaplontic, Diplobiontic) life cycle (organism with
both diploid and haploid "alternate life stages" that reproduce asexually by
mitosis) with "sporic meiosis" evolves.

In this life cycle haploid gametes fuse to form a diploid zygote which divides
by meiosis producing haploid spores that produce (differentiate?) gametes,
starting the cycle again.

Initially these species are single celled in both stages (like Haptophyta).

All plants,
most brown algae, blastocladiid chytrids, many red algae, and some filamentous
green algae (e.g. Cladophora) and foraminifera have haplodiploid life cycles.

Initially, these organisms are single celled, but later the mitosis stages will
become multicellular when the cells that result from mitosis stick together.
The only? example of this is Haptophyta, where diploid cells divide in sporic
meiosis, into haploid cells (gamonts) which then divide into gametes.



  
1,988,000,000 YBN
3
317) Eukaryotes that have mitochondria with flat christae evolve from those
with tubular christae.1 2


FOOTNOTES
1. ^ http://nar.oxfordjournals.org/cgi/content/full/26/4/865
2. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P1901&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

3. ^ guess based on one jakobid having tubular that change to flat, aside from
that cryptomonads are firs
  
1,982,000,000 YBN
17 18 19
87) Genetic comparison shows the most primitive living members of the Phylum
"Euglenozoa" (euglenids, leishmania, trypanosomes, kinetoplastids) evolved at
this time.1 2 3

This is the oldest eukaryote to exhibit colonialism. Perhaps eukaryote
colonialism is partially or fully inherited from prokaryotes, but colonialism
may have evolved independently again in eukaryotes.

This is the most ancient species known to have a cell covering, which is of the
type "pellicle".

No examples of sexual reproduction in the group have been found. 4
Reproduction is through closed mitosis and involves an internal spindle. 5 At
least one account of a sexual cycle has been reported in Scytomonas. 6

The chloroplasts are contained in three membranes and are pigmented similarly
to the plants, suggesting they were retained from some captured green alga.
All
Euglenozoa have mitochondria with discoid cristae, which in the kinetoplastids
characteristically have a DNA-containing granule or kinetoplast associated with
the flagellar bases.
I think they are still haploid, mitosis duplicates in nucleus?
Euglenozoa
age?

This group is sometimes called "Discicristates" because all members have
mitochondria with "discoidal cristae". 7

Euglenids are the first eukaryotes with an eyespot. Most colored euglenids
also have a stigma or eyespot, which is a small splotch of red pigment on one
side of the flagellar pocket. This shades a collection of light sensitive
crystals near the base of the leading flagellum, so the two together act as a
sort of directional eye. Euglenozoa eyepots evolved from chloroplasts. This
is the beginning of a light sensory system which evolves to eyes?

A small number of euglinids have chloroplasts and can photosynthesize. In
these species, the chloroplasts contain three membranes and are thought to have
evolved at least 900 million years later from a captured green alga.

Euglenoids, however, share reproductive habits with their kinetoplastid
relations by reproducing mainly by asexual binary fission. Euglenoids reproduce
very rapidly, absorbing their flagellum and dividing haploid cells through
mitosis. Mitosis produces 4-8 flagellated haploid cells, called zoospores. The
zoospores then break out of the parent cell and grow to full size. 8

condensed chromosomes: yes in all kinetoplasts, and some euglenophyta. 9
polar
structures: none 10
number of flagella: kinetoplastids=(1 in some) 2,
euglenophyta=2 (4 in some) 11
life forms: 12
unicellular: flagellated 13
multic
ellular: colonial 14
cell covering: pellicle 15

2. Euglenoids are small (10-500 µm) freshwater unicellular organisms.
3.
One-third of all genera have chloroplasts; those that lack chloroplasts ingest
or absorb their food.
4. Their chloroplasts are surrounded by three rather
than two membranes.
a. Their chloroplasts resemble those of green algae.

b. They are probably derived from a green algae through endosymbiosis.
5. The pyrenoid
outside the chloroplast produces an unusual type of carbohydrate polymer
(paramylon)
not seen in green algae.
6. They possess two flagella, one of
which typically is much longer and than the other and projects
out of a
vase-shaped invagination; it is called a tinsel flagellum because it has hairs
on it.
7. Near the base of the longer flagellum is a red eyespot that
shades a photoreceptor for detecting light.
8. They lack cell walls, but
instead are bounded by a flexible pellicle composed of protein strips
side-by-side.
9. A contractile vacuole, similar to certain protozoa, eliminates
excess water.
10. Euglenoids reproduce by longitudinal cell division; sexual
reproduction is not known to occur. 16

PHYLUM Euglenozoa
CLASS Euglenoidea
CLASS Diplonemea
CLASS Kinetoplastea
CLASS Postgaardea

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Russell F. Doolittle, Da-Fei Feng,
Simon Tsang, Glen Cho, Elizabeth Little, "Determining Divergence Times of the
Major Kingdoms of Living Organisms with a Protein Clock", Science, (1996).
4. ^
http://comenius.susqu.edu/bi/202/EXCAVATA/DISCICRISTATAE/euglenoida.htm
5. ^ http://comenius.susqu.edu/bi/202/EXCAVATA/DISCICRISTATAE/euglenoida.htm
6. ^
http://comenius.susqu.edu/bi/202/EXCAVATA/DISCICRISTATAE/euglenoida.htm
7. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989). p98-99
8. ^
http://biology.kenyon.edu/Microbial_Biorealm/eukaryotes/euglenozoa/euglenozoa.ht
m

9. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989). p98-99
10. ^ Michael Sleigh, "Protozoa and Other Protists", (London;
New York: Edward Arnold, 1989). p98-99
11. ^ Michael Sleigh, "Protozoa and Other
Protists", (London; New York: Edward Arnold, 1989). p98-99
12. ^ Michael Sleigh,
"Protozoa and Other Protists", (London; New York: Edward Arnold, 1989). p98-99
13. ^
Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989). p98-99
14. ^ Michael Sleigh, "Protozoa and Other Protists", (London;
New York: Edward Arnold, 1989). p98-99
15. ^ Michael Sleigh, "Protozoa and Other
Protists", (London; New York: Edward Arnold, 1989). p98-99
16. ^
http://www.sirinet.net/~jgjohnso/apbio30.html
17. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1961)
18. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
19. ^ Russell F.
Doolittle, Da-Fei Feng, Simon Tsang, Glen Cho, Elizabeth Little, "Determining
Divergence Times of the Major Kingdoms of Living Organisms with a Protein
Clock", Science, (1996). (1800-1900 for eukaryote/prokaryote separation)
  
1,982,000,000 YBN
15 16 17
294) Genetic comparison shows the Phylum "Percolozoa" (also called
"Heterolobosea"1 ) (acrasid slime molds) evolved at this time.2 3 4

Percolozoa
are a group of heterotrophic colourless protozoa, including many that can
transform between amoeboid, flagellate, and encysted stages. These are
collectively referred to as amoeboflagellates, schizopyrenids, or vahlkampfids.
They also include the acrasids, a group of social amoebae that aggregate to
form sporangia.5 6 7

Very closely related to Euglenozoa.
All characteristics are like Euglenozoa:
Percolozoa
have mitochondria with discoid christae.
No examples of sexual reproduction in the group
have been found. Reproduction is through closed mitosis and involves an
internal spindle. 8
No chloroplasts (check) or (The chloroplasts are contained
in three membranes and are pigmented similarly to the plants, suggesting they
were retained from some captured green alga.9 )
I think they are still haploid,
mitosis duplicates in nucleus?
Percolozoa age?
Percolozoa are sometimes included in the
group "Discicristates" because all members have mitochondria with "discoidal
cristae".
No eyespots.

closed mitosis with internal spindle. 10

The Percolozoa are the most ancient species to have members that move by
pseudopodia, like amoeba.

PHYLUM Percolozoa 11
CLASS Heterolobosea
ORDER Schizopyrenida Singh, 1952
ORDER Acrasida
Shröter, 1886 (acrasids, cellular slime molds)
ORDER Lyromonadida Cavalier-Smith,
1993
CLASS Percolatea 12

ORDER Acrasida (acrasids, cellular slime molds):
a. Cellular slime molds
(Phylum Acrasiomycota) (ORDER Acrasida13 ) exist as individual amoeboid cells.
(Plasmodial slime molds, mycetozoa, which evolve later, exist as a plasmodium.
)
b. They live in soil and feed on bacteria and yeast.
c. As
food runs out, amoeboid cells release a chemical that causes them to aggregate
into a pseudoplasmodium.
d. The pseudoplasmodium stage is temporary; it gives rise to
sporangia that produce spores.
e. Spores survive until more favorable
environmental conditions return; then they germinate.
f. Spore germinate to
release haploid amoeboid cells, which is again the beginning of asexual cycle.

g. Asexual cycle occurs under very moist conditions. 14

FOOTNOTES
1. ^ Ted Huntington.
2. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L
Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). 1961mybn
3. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). 1600 mybn
4. ^ Russell F. Doolittle,
Da-Fei Feng, Simon Tsang, Glen Cho, Elizabeth Little, "Determining Divergence
Times of the Major Kingdoms of Living Organisms with a Protein Clock", Science,
(1996). 1800-1900 mybn
5. ^ "Percolozoa". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Percolozoa
6. ^ http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P2989
7. ^ Raven, Evert, Eichhorn, "Biology of Plants", (New York: Worth
Publishers, 1992). p178
8. ^ Michael Sleigh, "Protozoa and Other Protists", (London;
New York: Edward Arnold, 1989). p98-99
9. ^ Ted Huntington.
10. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P2989
11. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=114287
12. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=114287
13. ^ Ted Huntington.
14. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
15. ^ S Blair Hedges, Jaime E Blair, Maria L
Venturi and Jason L Shoe, "A molecular timescale of eukaryote evolution and
the rise of complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). 1961mybn (1961)
16. ^ Richard Dawkins, "The
Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004). 1600 mybn
(1600mybn)
17. ^ Russell F. Doolittle, Da-Fei Feng, Simon Tsang, Glen Cho, Elizabeth
Little, "Determining Divergence Times of the Major Kingdoms of Living Organisms
with a Protein Clock", Science, (1996). 1800-1900 mybn (1800-1900(for
eukaryote/prokaryote separation)
  
1,980,000,000 YBN
3
38) Multicellularity evolves in a protist.

Multicellularity is a very important event in the evolution of life on earth.
With multicellular organisms, larger sized organisms could evolve.

There are many uncertainties surrounding the origin of multicellularity.
Multicellularity may have evolved independently for Plants, Fungi and Animals,
or multicellularity may have evolved only once in eukaryotes.

The key feature of this cell is that a multicellular organism is made from a
single cell and the multicellular organism is not a collection of independent
cells (colonialism). The main difference between this organism and
single-celled organisms is the way the cells stay fastened together after cell
division.

Which species was the first multicellular species is not clear.
Multicellularity is found in all 3 life cycles (haplontic, diplontic,
haplodiplontic). The 3 main life cycle types (haplontic, etc.) probably
evolved in single cell species before multicellularity evolved. If
multicellularity evolved once and is inherited, perhaps all multicellular
organism descended from a single haplodiplontic organism.

These multicellular organisms have undifferentiated cells in the multicellular
stage (all cells in the haploid or diploid multicellular organism are made of
one kind of cell).

Dinophyta, and Fungi are multicellular Haplontic species.
Most
animals are multicellular Diplontic species.
Most brown algae and all plants are
multicellular Haplodiplontic species.

The vast majority of multicellular organisms reproduce only through sex,
although there are exceptions (like some plants and rotifers) which have lost
the ability to sexually reproduce or can also reproduce asexually. In
multicellularity, one cell goes on to produce all the cells in a multicellular
species, so that each individual organism is genetically unique. This cell is
usually a diploid zygote, but can be a haploid cell.

This protist is most likely sexual, and multicellularity evolved only in a
species that reproduces sexually.

Some describe algae multicellularity as "filamentous".1

The first multicellular eukaryuotes are presumably undifferentiated. For
haplontic these cells are all gametes, for diplontic these cells are all
capable of meiosis to form gametes, for haplodiplontic, in the haploid stage
the cells are all gamete producing, in the diploid stage the cells are all
spore producing.

Some people think that multicellular organisms arose at least six times: in
animals, fungi and several groups of algae. 2

FOOTNOTES
1. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989).
2. ^
http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v391/n6667/full/
391553a0_fs.html

3. ^ Ted Huntington, guess based on absence of published information
  
1,978,000,000 YBN
1
15) Multicellularity with differentiation evolves.

Multicellular organisms are no longer all haploid or diploid gamete producing
cells (or spore producing if haplodiplontic), but are made of gamete (or spore)
producing cells in addition to somatic cells which copy asexually through
mitosis.

Now, in addition to being large multicell organisms, multicellular organisms
can have differentiated cells that form a variety of different shaped
structures, and perform different functions.

This process will evolve to the metazoan
multicellular differentiation that arises from a single zygote cell, where
cells have different functions and shapes.
Differentiation evolves for a second time in
eukaryotes?
this is not the first monoadmulti one cell leading to a multicellular organism
(attached, free, interchangible)?
where a multicellular organism is made from one cell
(interchangable, specific cells: genetic specificity).

It is unknown how multicellular life stages happen. For example, why one
specific cell line of many produced from mitosis of a zygote will go on to do
meiosis producing the haploid gamete cells which will fuse to form the next
zygote, but the many other cells made from, for example, one of the two cells
made after the zygote divides, will not contain the line of cells that
ultimately make the gamete producing cells which continue the life cycle of the
organism. Since presumably each cell in an organism contains an identical
genome, perhaps a gamete producing cell can be made from any cell if specific
proteins are present, or perhaps there is a protein which simply points to a
certain location in the DNA which is located at a different location in the DNA
for every cell, or perhaps some other explanation answers the question of how
cell differentiation can happen when each cell has the same genome.

A (diploid) zygote cell (the cell made by two merging gamete cells) now divides
to form all cells in the differentiated multicellular organism, and is said to
be "totipotent". Totipotent cells differentiate into "pluripotent" cells which
can make most but not all cells in the organism. Pluripotent cells
differentiate into "multipotent" (can make a number of cells) or "unipotent"
cells (can only make one kind of cell).

FOOTNOTES
1. ^ Ted Huntington. guess. is after haploid mitosis? after fusion?
  
1,974,000,000 YBN
169) For those that think algae are plants, this is where the plant kingdom
begins with the evolution of brown algae (phaeophyta).1

FOOTNOTES
1. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989).
  
1,973,000,001 YBN
6 7 8
88) Genetic comparison shows the ancestor of the "Chromalveolates" evolving
now. Chromalveolates include the Chromista and Alveolata. The Chromista
include the 3 Phyla Haptophyta, Cryptophyta (Cryptomonads), and
Heterokontophyta (brown algae {kelp}, diatoms, water molds). Alveolata include
the 3 Phyla Dinoflagellata, Apicomplexa (Malaria, Toxoplasmosis), and
Ciliophora (ciliates).1 2 3

Chromealveolates have mitochondria with tubular
cristae.

Thomas Cavalier-Smith writes: "The chromalveolate clade (Cavalier-Smith 1999)
and its constituent taxa, kingdom Chromista (Cavalier-Smith 1981) and protozoan
infrakingdom Alveolata (Cavalier-Smith 1991b), were all proposed based on
morphological, biochemical, and evolutionary reasoning about protein targeting
before there was sequence evidence for any of them. Now all are strongly
supported by such evidence. Chromalveolates comprise all algae with chlorophyll
c (the chromophyte algae) and all their nonphotosynthetic descendants. They
arose by a single symbiogenetic event in which an early unicellular red alga
was phagocytosed by a biciliate host and enslaved to provide photosynthate
(Cavalier-Smith 1999, 2002c, 2003a). The strongest evidence that this occurred
once only in their cenancestor is the replacement of the red algal plastid
glyceraldehyde phosphate dehydrogenase (GAPDH) by a duplicate of the gene for
the cytosolic version of this enzyme in all four chromalveolate groups with
plastids: the alveolate sporozoa and dinoflagellates and the chromist
cryptomonads and chromobiotes (Fast et al. 2001). It would be incredible for
such gene duplication, retargeting by acquiring bipartite targeting sequences,
and loss of the original red algal gene to have occurred convergently in four
groups, but it was already pretty incredible that these groups would all have
evolved a similar protein-targeting system independently and all happened to
enslave a red alga, evolve chlorophyll c, and place their plastids within the
rough endoplasmic reticulum (ER) independently. Yet many assumed just this
because of the false dogma that symbiogenesis is easy and the failure of all
these groups to cluster in rRNA trees. For chromobiotes this retargeting of
GAPDH has been demonstrated only for heterokonts-information is lacking for
haptophytes. However, there are five strong synapomorphies for Chromobiota,
making it highly probable that the group is holophyletic (Cavalier-Smith 1994).
They share the presence of the periplastid reticulum in the periplastid space
instead of a nucleomorph like cryptomonads, they uniquely make the carotenoid
fucoxanthin and chlorophyll c3, they uniquely have a single autofluorescent
cilium, and they have tubular mitochondrial cristae with an intracristal
filament. Five plastid genes now extremely robustly support the monophyly of
both chromists and chromobiotes (Yoon et al. 2002). We are confident that
comparable sequence evidence from nuclear genes will also eventually catch up
with the general biological evidence for the holophyly of chromobiotes to
convince even the most skeptical, who ignore or discount such valuable evidence
that chromobiotes are holophyletic." 4

Chromista include phyla:
Heterokontophyta (heterokonts) (many classes) (includes
colored: golden algae, axodines, diatoms, yellow-green algea, brown algae,
colorless: water moulds, slime nets)
Haptophyta
Cryptophyta (cryptomonads) (many genera)

Alveolates include the phyla:
Dinoflagellata (Dinoflagellates)
Apicomplexa (Apicomplexans)
Ciliophora (ciliates)

In 1981 Cavalier-Smith created a new kingdom called "Chromista" in which all
chromalveolates are placed. 5

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000).
4. ^
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=retrieve&db=pubmed&list_uids=1
2698292&dopt=Abstract
J Mol Evol. 2003 May;56(5):540-63. Phylogeny of
choanozoa, apusozoa, and other protozoa and early eukaryote
megaevolution. Cavalier-Smith T, Chao
EE. /home/ted/ulsf/docs/cav-smith_apusozoa_fulltext.html
5. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=85966
http://comenius.susqu.edu/BI/202/Taxa.htm (for 5 supergroups info)
6. ^ S Blair
Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A molecular
timescale of eukaryote evolution and the rise of complex multicellular life",
BMC Evolutionary Biology 2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
(1973mybn)
7. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). (1600mybn)
8. ^ Sandra L. Baldauf, A. J. Roger, I. Wenk-Siefert, W. F.
Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based on Combined Protein
Data", Science, Vol 290, num 5493, p 972, (2000). has heterkonts before
ciliophora and apicomplexa branch

MORE INFO
[1] "Brown alga". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Brown_alga
  
1,972,000,000 YBN
17 18 19
304) Genetic comparison shows the ancestor of Chromalveolate Phlyum Haptophyta
evolving now.1 2 3

Some Haptophytes are haplodiploid (alternate between
haploid and diploid cycles that both have mitosis), and this group is the most
primitive with a haplodiploid life cycle.

Haptophytes are single cellular.4

Haptophytes are found only in all oceans (marine) and are flagellates, almost
all with plastids with chlorophylls a and c, with two flagella and one
additional locomotor/feeding organelle, the haptonema.5

Haptophyta are a group of algae (phytoplankton).
The chloroplasts are pigmented similarly to
those of the heterokonts, such as golden algae, but the structure of the rest
of the cell is different, so it may be that they are a separate line whose
chloroplasts are derived from similar endosymbionts.6
The cells typically have
two slightly unequal flagella, both of which are smooth, and a unique organelle
called a haptonema, which is superficially similar to a flagellum but differs
in the arrangement of microtubules and in its use.7
Haptophytes have tubular
mitochondria cristae.8
Most haptophytes are coccolithophores, which live
strictly in the oceans (marine) and are ornmmented with calcified scales called
coccoliths, which are sometimes found as microfossils. Other planktonic
haptophytes of note include Chrysochromulina and Prymnesium, which periodically
form toxic marine algal blooms. Both molecular and morphological evidence
supports their division into five orders.9 10

Emiliania is a small organism that is famous for turning huge portions of the
ocean bright turquoise during its blooms. They are also known for contributing
to the white cliffs of Dover because of the calcite in their coccolith cell
structure. They play a very important role in the carbon cycle in the ocean
because they form calcium carbonate exoskeletons that sink to the bottom of the
ocean floor when they die. They are also one of the worlds major calcite
producers.11

Sexual reproduction: Asexual, Open mitosis with spindle nucleating
(originating?12 ) in cytoplasm.13
Phaeocystis colonial cells diploid, motile
cells haploid or diploid; reproduction by vegetative division of non-motile
cells and fragmentation of colonies, vegetative division of motile cells, or by
fusion of gametes.14

Members of the Haptophytes Genus "Phaocystis" form colonies (see photo15 ).

Haptophytes are also called "Prymnesiophytes" 16

Some Haptophyta have hard shell made of calcium carbonate evolves around the
single-celled species living in the ocean.

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000).has
heterkonts before ciliophora and apicomplexa branch
4. ^
http://www.life.umd.edu/labs/delwiche/PSlife/lectures/Haptophyta.html
5. ^ http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P10520
6. ^ empty
7. ^ empty
8. ^ empty
9. ^ empty
10. ^ empty
11. ^
http://biology.kenyon.edu/Microbial_Biorealm/eukaryotes/emiliania/emiliania.htm
12. ^ Ted Huntington.
13. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P10520
14. ^
http://microscope.mbl.edu/scripts/microscope.php?func=imgDetail&imageID=2627
15. ^ Ted Huntington.
16. ^ http://www.ucmp.berkeley.edu/chromista/prymnesiophyta.html
Larsen, A. (1999). Prymnesium parvum and P. patelliferum (Haptophyta) - one
species. Phycologia 38: 541-543
17. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi
and Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise of
complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
18. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
19. ^ Sandra L. Baldauf,
A. J. Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). (has heterkonts before ciliophora and apicomplexa branch)
  
1,971,000,000 YBN
15 16 17
305) Genetic comparison shows the ancestor of the Chromalveolate Phylum
"Cryptophyta" (Cryptomonads) evolving now.1 2 3

The cryptomonads are a small
group of flagellates, most of which have chloroplasts. They are common in
freshwater, and also occur in marine and brackish habitats. Each cell has an
anterior groove or pocket with typically two slightly unequal flagella at the
edge of the pocket. 4
Cryptomonads distinguished by the presence of
characteristic extrusomes called ejectisomes, which consist of two connected
spiral ribbons held under tension. If the cells are irritated either by
mechanical, chemical or light stress, they discharge, propelling the cell in a
zig-zag course away from the disturbance. Large ejectisomes, visible under the
light microscope, are associated with the pocket; smaller ones occur elsewhere
on the cell. 5
Cryptomonads have one or two chloroplasts, except for Chilomonas
which has leucoplasts and Goniomonas which lacks plastids entirely. These
contain chlorophylls a and c, together with phycobilins and other pigments, and
vary in color from brown to green. Each is surrounded by four membranes, and
there is a reduced cell nucleus called a nucleomorph between the middle two.
This indicates that the chloroplast was derived from a eukaryotic symbiont,
shown by genetic studies to have been a red alga. 6

A few cryptomonads, such as Cryptomonas, can form palmelloid stages, but
readily escape the surrounding mucus to become free-living flagellates again.
Cryptomonad flagella are inserted parallel to one another, and are covered by
bipartite hairs called mastigonemes, formed within the endoplasmic reticulum
and transported to the cell surface. Small scales may also be present on the
flagella and cell body. The mitochondria have flat cristae, and mitosis is
open; sexual reproduction has also been reported.7

Originally the cryptomonads were considered close relatives of the
dinoflagellates because of their similar pigmentation. Later botanists treated
them as a separate division, Cryptophyta, while zoologists treated them as the
flagellate order Cryptomonadida. There is considerable evidence that
cryptomonad chloroplasts are closely related to those of the heterokonts and
haptophytes, and the three groups are sometimes united as the Chromista.
However, the case that the organisms themselves are related is not very strong,
and they may have acquired chloroplasts independently.8

Crytomonads often forms blooms in greater depths of lakes, or during winter
beneath the ice. The cells are usually brownish in color, and have a slit-like
furrow at the anterior. They are not known to produce any toxins and are used
to feed small zooplankton, which is the food source for small fish in fish
farming. 9

Reproduction:
Number of species:
Size and shape: 10-50 μm in size and flattened in shape
Mitochondria
Christae: flat 10 11 12 (which is unusual, as most chromalveolates have
tubular christae). Cryotphyta may be more closely related to the Plant Kingdom
and nearest Glaucophyta which also have flat christae.

After one species of jakobid that changes tubular to flat christae, cryptophyta
are the most ancient phylum to have flat christae. 13 14

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000).
4. ^
"Cryptophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cryptophyta
5. ^ "Cryptophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cryptophyta
6. ^ "Cryptophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cryptophyta
7. ^ "Cryptophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cryptophyta
8. ^ "Cryptophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cryptophyta
9. ^ "Cryptomonas". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cryptomonas
10. ^ "Cryptophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cryptophyta
11. ^ http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P1761
12. ^
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=8
328023&dopt=Abstract
http://ijs.sgmjournals.org/cgi/content/full/53/6/1707
describes some of the conflict about the placement of cryptomonads
13. ^
http://nar.oxfordjournals.org/cgi/content/full/26/4/865
14. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P1901&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

15. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
16. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
17. ^ Sandra L. Baldauf,
A. J. Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch
  
1,970,000,000 YBN
5 6 7
306) Genetic comparison shows the ancestor of the Chromalveolate Phylum
"Heterokontophyta" (Heterokonts also called Stramenopiles) evolving now.
Heterokonts include brown algae, diatoms, golden algae, axodines, yellow-green
algae, water moulds and slime nets.1 2 3

Heterkonts evolved very near the same
time as the Euglinozoa did.
Heterokonts all have mitochondria with tubular christae.
The motile cells of heterokonts all have two unequal cilia (flagella), one
"tinsel" (covered with hairs {mastigonemes}) cilium and one "whiplash" (free of
hair) cilium.4

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000). has
heterkonts before ciliophora and apicomplexa branch
4. ^
http://comenius.susqu.edu/BI/202/CHROMALVEOLATA/HETEROKONTAE/HETEROKONTAE.html
5. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
6. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
7. ^ Sandra L. Baldauf, A. J.
Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch
  
1,969,000,000 YBN
5 6 7
307) Chromalveolate Heterokont, Brown Algae (Phaeophyta) evolves now.1 2 3

Brown Algae is the most genetically ancient multicellular organism still living
on earth. In addition to being first to evolve multicellularity, cell
differentiation (cells of different types) is already present in all brown
algae.

Genetic comparison shows the ancestor of the Chromalveolate Heterokont Brown
Algae (Phaeophyta) evolving now.

Brown Algae is the most genetically ancient multicellular organism still living
on earth. In addition to being first to evolve multicellularity, cell
differentiation (cells of different types) is already present in all brown
algae.

Brown algae belong to a large group called the heterokonts, most of which are
colored flagellates. Most contain the pigment fucoxanthin, which is responsible
for the distinctive greenish-brown color that gives brown algae their name.
Brown algae are unique among heterokonts in developing into multicellular forms
with differentiated tissues, but they reproduce by means of flagellate spores,
which closely resemble other heterokont cells. Genetic studies show their
closest relatives are the yellow-green algae. 4

Most Brown algae are haplodiplontic.

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000). has
heterkonts before ciliophora and apicomplexa branch
4. ^ "Phaeophyta". Wikipedia.
Wikipedia, 2008. http://en.wikipedia.org/wiki/Phaeophyta
5. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and
Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise of
complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
6. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
7. ^ Sandra L. Baldauf, A. J.
Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch
  
1,968,000,000 YBN
7 8 9
308) Chromalveolate Heterokont, Diatoms evolve.1 2 3
Genetic comparison shows
the ancestor of the Chromalveolate Heterokont Diatoms evolving now.

Diatoms are diplontic. 4

Diatoms are a very common types of phytoplankton. Most diatoms are unicellular,
although some form chains or simple colonies. A characteristic feature of
diatom cells is that they are encased within a unique cell wall made of silica.
These walls show a wide diversity in form, some quite beautiful and ornate, but
usually consist of two symmetrical sides with a split between them, hence the
group name. 5

Life Cycle
When a cell divides each new cell takes as its epitheca a valve of the
parent frustule, and within ten to twenty minutes builds its own hypotheca;
this process may occur between one and eight times per day. Availability of
dissolved silica limits the rate of vegetative reproduction, but also because
this method progressively reduces the average size of the diatom frustule in a
given population there is a certain threshold at which restoration of frustule
size is neccesary. Auxospores are then produced, which are cells that posses a
different wall structure lacking the siliceous frustule and swell to the
maximum frustule size. The auxospore then forms an initial cell which forms a
new frustule of maximum size within itself. 6

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000). has
heterkonts before ciliophora and apicomplexa branch
4. ^ Michael Sleigh, "Protozoa and
Other Protists", (London; New York: Edward Arnold, 1989). p98-99
5. ^ "Diatom".
Wikipedia. Wikipedia, 2008. http://en.wikipedia.org/wiki/Diatom
6. ^
http://www.ucl.ac.uk/GeolSci/micropal/diatom.html
7. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
8. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
9. ^ Sandra L. Baldauf, A. J.
Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch
  
1,967,000,000 YBN
16 17 18
309) Chromalveolate Heterokont, Water molds (Oomycetes OemISETEZ) evolve.1 2 3

Genetic comparison shows the ancestor of the Chromalveolate Heterokont Water
molds (Oomycetes OemISETEZ) evolving now.

Oomycetes (Water molds), with about 580 species, vary from unicellular, to
multicellular highly brached filamentous forms. 4 The filamentous form is
called "coenocytic" (grows as a large multinucleate cell that results from
multiple nuclear divisions without cell divisions, also called "mycelium" in
fungi) 5 6 Oomycetes grow by closed (or nearly closed) mitosis with pairs of
centrioles near the poles 7 . Filamentous forms grow by mitosis, but only the
nucleus is duplicated (karyokinesis), no septa (horizontal cell wall) is
constructed, making these multinucleate very large single cells. Technically,
filamentous oomycetes are 3 celled multicellular organisms because a septa
forms between the vegetative filament and the diploid sporangium (and oogonium)
cells (and the haploid antheridium multinucleate cells are not free swimming),
but many people label oomycetes as single celled organism. But it appears
clear that oomycetes would be constructed of many cells if a cell wall was
built at mitosis. Sexual forms are diploid and reproduce by conjugation.

Water Molds are microscopic organisms that reproduce both sexually and
asexually and are composed of mycelia, or a tube-like vegetative body (all of
an organism's mycelia are called its thallus). The name "water mould" refers to
the fact that they thrive under conditions of high humidity and running surface
water. 8

Water molds were originally classified as fungi, but are now known to have
developed separately and show a number of differences. Their cell walls are
composed of cellulose rather than chitin and lack septa (a wall that divides
two spaces) except where reproductive cells are produced, in addition to having
gene sequences more closely related to brown algae than fungi.9 Also, in the
vegetative state they have diploid nuclei, whereas fungi have haploid nuclei.
10 11

The oomycetes include the water molds, white rusts and the downy mildews. Many
oomycetes are multinucleate filaments (hyphae) that resemble fungi. These
hyphae have no cross walls, but are one long hollow tube and are called
"coenocytic". They were once thought to be related to the fungi, but their cell
walls are made of cellulose, not chitin as they are in the true fungi. The
superficial resemblance of the fungi and the oomycetes is likely a case of
convergent evolution. Both groups have a filamentous (hyphal) body form with a
high surface area to volume ration which facilitates uptake of nutrients from
their surroundings. 12

The oomycetes are saprobic and parasitic forms, including water molds like
Saprolegnia and downey mildews like Peronospora. 13

1. These organisms (and slime molds) resemble fungi but all have
flagellated cells which fungi never do.
2. Water molds possess a cell wall
but it is made of cellulose, not chitin as in fungi.
3. Water molds produce
diploid (2n) zoospores and meiosis produces the gametes. 14

2. Aquatic water molds parasitize fishes, forming furry growths on
their gills, and decompose remains.
3. Terrestrial water molds parasitize
insects and plants; a water mold caused the 1840s Irish potato famine.
4. Water
molds have a filamentous body but cell walls are composed largely of
cellulose.
5. During asexual reproduction, they produce diploid motile spores (2n
zoospores) with flagella.
6. Unlike fungi, the adult is diploid; gametes are
produced by meiosis.
7. Eggs are produced in enlarged oogonia. 15

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000). has
heterkonts before ciliophora and apicomplexa branch
4. ^ Raven, Evert, Eichhorn,
"Biology of Plants", (New York: Worth Publishers, 1992).
5. ^
http://www.ilmyco.gen.chicago.il.us/Terms/coeno128.html#coeno128
6. ^ "Coenocyte". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Coenocyte
7. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989).
8. ^ "Water moulds". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Water_moulds
9. ^
http://users.rcn.com/jkimball.ma.ultranet/BiologyPages/P/Protists.html#Water_Mol
ds

10. ^ "Water moulds". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Water_moulds
11. ^ http://www.plantbio.uga.edu/zoosporicfungi/oomycete.htm
12. ^ http://kentsimmons.uwinnipeg.ca/16cm05/1116/16protists.htm
13. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New
York: Edward Arnold, 1989).
14. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
15. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
16. ^ S Blair Hedges, Jaime E Blair, Maria L
Venturi and Jason L Shoe, "A molecular timescale of eukaryote evolution and
the rise of complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
17. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
18. ^ Sandra L. Baldauf,
A. J. Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch
  
1,966,000,000 YBN
7 8 9
310) Chromalveolate Alveolata (Ciliates, Dinoflagellates, Apicomplexans)
evolve.1 2 3

Genetic comparison shows the ancestor of the Chromalveolate
Alveolata (Ciliates, Dinoflagellates, Apicomplexans) evolving now.

The alveolates are a major line of protists. There are three main groups, which
are very divergent in form, but are now known to be close relatives based on
various ultrastructural and genetic similarities:
Ciliates Very common protozoa, with many
short cilia arranged in rows
Apicomplexa Parasitic protozoa that lack locomotive
structures except in gametes
Dinoflagellates Mostly marine flagellates, many of which
have chloroplasts4

The most notable shared characteristic is the presence of cortical alveoli,
flattened vesicles packed into a continuous layer supporting the membrane,
typically forming a flexible pellicle. In dinoflagellates they often form armor
plates. Alveolates have mitochondria with tubular cristae, and their flagella
or cilia have a distinct structure.5

The Apicomplexa and dinoflagellates may be more closely related to each other
than to the ciliates. Both have plastids, and most share a bundle or cone of
microtubules at the top of the cell. In apicomplexans this forms part of a
complex used to enter host cells, while in some colorless dinoflagellates it
forms a peduncle used to ingest prey. 6

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000). has
heterkonts before ciliophora and apicomplexa branch
4. ^ "Alveolata". Wikipedia.
Wikipedia, 2008. http://en.wikipedia.org/wiki/Alveolata
5. ^ "Alveolata". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Alveolata
6. ^ "Alveolata". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Alveolata
7. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
8. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
9. ^ Sandra L. Baldauf, A. J.
Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch
  
1,964,000,000 YBN
9 10 11
312) Ciliates evolve.1 2 3
Genetic comparison shows the ancestor of the
Chromalveolate Alveolata Ciliates evolving now.

The ciliates are one of the most important groups of protists, common almost
everywhere there is water - lakes, ponds, oceans, and soils, with many ecto-
(lives on host) and endosymbiotic (lives in host) members, as well as some
obligate (depends on host for survival) and opportunistic parasites (does not
depend on host for survival). Ciliates tend to be large protists, a few
reaching 2 mm in length, and are some of the most complex in structure. The
name ciliate comes from the presence of hair-like organelles called cilia,
which are identical in structure to flagella but typically shorter and present
in much larger numbers. Cilia occur in all members of the group, although the
peculiar suctoria only have them for part of the life-cycle, and are variously
used in swimming, crawling, attachment, feeding, and sensation.4

Unlike other eukaryotes, ciliates have two different sorts of nuclei: a small,
diploid micronucleus (reproduction), and a large, polyploid macronucleus
(general cell regulation). The latter is generated from the micronucleus by
amplification of the genome and heavy editing. The high degree of polyploidi
allows the cell to sustain an appropriate level of transcription. Division of
the macronucleus does not occur by a mitotic process but segregation of the
chromosomes is by a different process, whose mechanism is unknown. This
process is not perfect, and after about 200 generations the cell shows signs of
aging (has so many mutations that it does not function properly). Periodically
the macronuclei is (must be?) regenerated from the micronuclei. In most, this
occurs during sexual reproduction, which is not usually through syngamy but
through conjugation. Here two cells line up, the micronuclei undergo meiosis,
some of the haploid daughters are exchanged and then fuse to form new micro-
and macronuclei.5

With a few exceptions, there is a distinct cytostome or mouth where ingestion
takes place. Food vacuoles are formed through phagocytosis and typically follow
a particular path through the cell as their contents are digested and broken
down via lysosomes so the substances the vacuole contains are then small enough
to diffuse through the membrane of the food vacuole into the cell. Anything
left in the food vacuole by the time it reaches the cytoproct (anus) is
discharged via exocytosis. Most ciliates also have one or more prominent
contractile vacuoles, which collect water and expel it from the cell to
maintain osmotic pressure, or in some function to maintain ionic balance. These
often have a distinctive star-shape, with each point being a collecting tube.6


Most ciliates feed on smaller organisms (heterotrophic), such as bacteria and
algae, and detritus swept into the mouth by modified oral cilia. These usually
include a series of membranelles to the left of the mouth and a paroral
membrane to its right, both of which arise from polykinetids, groups of many
cilia together with associated structures. This varies considerably, however.
Some ciliates are mouthless and feed by absorption, while others are predatory
and feed on other protozoa and in particular on other ciliates. This includes
the suctoria, which feed through several specialized tentacles.7

Ciliates and Amoeboids have in common:
Food is digested in food vacuoles.
Excess water is
expelled by contractile vacuoles. 8

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000). has
heterkonts before ciliophora and apicomplexa branch
4. ^ "Ciliates". Wikipedia.
Wikipedia, 2008. http://en.wikipedia.org/wiki/Ciliates
5. ^ "Ciliates". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Ciliates
6. ^ "Ciliates". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Ciliates
7. ^ "Ciliates". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Ciliates
8. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
9. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
10. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
11. ^ Sandra L. Baldauf,
A. J. Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch
  
1,963,000,000 YBN
12 13 14
313) Dinoflagellates evolve.1 2 3
Genetic Ribosomal RNA comparison shows
Chromalveolate Alveolata, Dinoflagellates evolve.
Dinoflagellates reproduce mainly by
haploid mitosis, but also reproduce sexually.

In dinoflagellates, the chromosomes are always visible and do not condense
prior to mitosis. The chromosomes are attached to the nuclear envelope, which
persists during mitosis. 4

The main method of reproduction of the dinoflagellates is by longitudinal cell
division, with each daughter cell receiving one of the flagella ad a portion of
the theca and then constructing the missing parts in a very intricate sequence.
Some nonmotile species form zoospores, which may be colonial. A number of
species reproduce sexually, mostly by isogamy, but a few species reproduce by
heterogamy (anisogamy). 5

Dinoflagellate zygotes are similar to some acritarchs (early eukaryote
fossils). 6

Some Dinoflagellates produce cysts. 7

The dinoflagellates are a large group of flagellate protists. Most are marine
plankton, but they are common in fresh water habitats as well; their
populations are distributed depending on temperate, saltiness, or depth. About
half of all dinoflagellates are photosynthetic, and these make up the largest
group of eukaryotic algae aside from the diatoms. Being primary producers make
them an important part of the food chain. Some species, called zooxanthellae,
are endosymbionts of marine animals and protozoa, and play an important part in
the biology of coral reefs. Other dinoflagellates are colorless predators on
other protozoa, and a few forms are parasitic. 8

Some dinoflagellates are reported to be filamentous (multicellular). 9
Mitochond
ria christae are tubular. 10
Dinoflagellates are haploid (haplontic). 11

FOOT
NOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Sandra L. Baldauf, A. J. Roger, I. Wenk-Siefert, W. F. Doolittle,
"A Kingdom-Level Phylogeny of Eukaryotes Based on Combined Protein Data",
Science, Vol 290, num 5493, p 972, (2000). has heterkonts before ciliophora and
apicomplexa branch
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
4. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P8047&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

5. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P8047&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

6. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P8047&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

7. ^ Raven, Evert, Eichhorn, "Biology of Plants", (New York: Worth Publishers,
1992). p98-99
8. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=199167&tree=0.1
9. ^ "Dinoflagellate". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Dinoflagellate
10. ^ "Dinoflagellate". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Dinoflagellate
11. ^ "Dinoflagellate". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Dinoflagellate
12. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). (1973mybn)
13. ^ Sandra L. Baldauf, A. J. Roger, I. Wenk-Siefert, W. F.
Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based on Combined Protein
Data", Science, Vol 290, num 5493, p 972, (2000). has heterkonts before
ciliophora and apicomplexa branch (1600mybn)
14. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
  
1,962,000,000 YBN
7 8 9
314) Apicomplexans evolve.1 2 3
Genetic comparison shows Apicomplexans evolve.

The Apicomplexa are a large group of protozoa, characterized by the presence
of an apical complex at some point in their life-cycle. They are exclusively
parasitic, and completely lack flagella or pseudopods except for certain gamete
stages. Diseases caused by Apicomplexa include:4

* Babesiosis (Babesia)
* Cryptosporidiosis (Cryptosporidium)
* Malaria (Plasmodium)
* Toxoplasmosis
(Toxoplasma gondii)5

Most members have a complex life-cycle, involving both asexual and sexual
reproduction. Typically, a host is infected by ingesting cysts, which divide to
produce sporozoites that enter its cells. Eventually, the cells burst,
releasing merozoites which infect new cells. This may occur several times,
until gamonts are produced, forming gametes that fuse to create new cysts.
There are many variations on this basic pattern, however, and many Apicomplexa
have more than one host.6

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Sandra L. Baldauf, A. J. Roger, I.
Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of Eukaryotes Based
on Combined Protein Data", Science, Vol 290, num 5493, p 972, (2000). has
heterkonts before ciliophora and apicomplexa branch
4. ^ "Apicomplexa". Wikipedia.
Wikipedia, 2008. http://en.wikipedia.org/wiki/Apicomplexa
5. ^ "Apicomplexa". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Apicomplexa
6. ^ "Apicomplexa". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Apicomplexa
7. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1973mybn)
8. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (1600mybn)
9. ^ Sandra L. Baldauf, A. J.
Roger, I. Wenk-Siefert, W. F. Doolittle, "A Kingdom-Level Phylogeny of
Eukaryotes Based on Combined Protein Data", Science, Vol 290, num 5493, p 972,
(2000). has heterkonts before ciliophora and apicomplexa branch

MORE INFO
[1] http://www.sirinet.net/~jgjohnso/apbio30.html
  
1,961,000,000 YBN
7 8
89) Genetic comparison shows Rhizaria (the Phyla "Radiolaria", "Cercozoa", and
"Foraminifera") evolve now.1 2

This marks the beginning of the protists described as "amoeboid", because they
have pseudopods.

5. Amoeboids phagocytize their food; pseudopods surround and engulf
prey.
6. Food is digested inside food vacuoles.
7. Freshwater amoeboids have contractile
vacuoles to eliminate excess water. 3

Some foraminifera are haplodiploid (alternate between haploid and diploid
cycles that both have mitosis).

The Rhizaria are a major line of protists. They vary considerably in form, but
for the most part they are amoeboids with filose, reticulose, or
microtubule-supported pseudopods. Many produce shells or skeletons, which may
be quite complex in structure, and these make up the vast majority of protozoan
fossils. Nearly all have mitochondria with tubular cristae. 4
There are three
main groups of Rhizaria:
Cercozoa Various amoebae and flagellates, usually with filose
pseudopods and common in soil
Foraminifera Amoeboids with reticulose pseudopods,
common as marine benthos
Radiolaria Amoeboids with axopods, common as marine plankton
5

The name Rhizaria was created recently by Cavalier-Smith in 2002. Most are
biciliate amoeboflagellates at some point in the life cycle. Pseudopodia are
root-like reticulopodia, filopodia and/or axopodia - not broad lobopodia as in
Amoeba. All of these features can, however, be found in members of other
clades. Nevertheless, the Rhizaria are supported by both rRNA and actin trees
(Cavalier-Smith & Chao, 2003; Nikolaev et al. 2004). 6

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe,
"A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
3. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
4. ^ "Rhizaria". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Rhizaria
5. ^ "Rhizaria". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Rhizaria
6. ^ http://www.palaeos.com/Eukarya/Units/Rhizaria/Rhizaria.html
7. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). has 1600my for excavates, discricristales, rhizaria,
chromalveolates, (1600my)
8. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason
L Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). I use this estimate
  
1,961,000,000 YBN
4 5
320) Rhizaria Phylum "Cercozoa" evolve now.1 2
The Cercozoa are a group of
protists, including most amoeboids and flagellates that feed by means of filose
pseudopods. These may be restricted to part of the cell surface, but there is
never a true cytostome or mouth as found in many other protozoa. They show a
variety of forms and have proven difficult to define in terms of structural
characteristics, although their unity is strongly supported by genetic
studies.3

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). has 1600mybn for excavates, discricristales, rhizaria,
chromalveolates
2. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
3. ^ "Cercozoa". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cercozoa
4. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). has 1600mybn for excavates, discricristales, rhizaria,
chromalveolates (1600mybn)
5. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason
L Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
  
1,960,000,000 YBN
8 9
319) Rhizaria Phylum "Radiolaria" evolve now.1 2
Ribosomal RNA indicates that
Rhizaria Phylum "Radiolaria" evolve now.

Radiolarians (also radiolaria) are amoeboid protozoa that produce intricate
mineral skeletons, typically with a central capsule dividing the cell into
inner and outer portions, called endoplasm and ectoplasm. They are found as
plankton throughout the ocean, and their shells are important fossils found
from the Cambrian onwards.3

Move by pseudopodia. 4
external tests made of silica (glass). 5

Radiolaria have a test composed of silica or strontium sulfate.
Most have a radial
arrangement of spines.
Pseudopods (actinopods) project from an external layer of
cytoplasm and are supported by rows of microtubules.
Tests of dead foraminiferans and
radiolarians form deep layers of ocean floor sediment.
Back to the Precambrian, each
layer has distinctive foraminiferans which helps date rocks.
Over hundreds of millions
of years, the CaCO3 shells have contributed to the formation of chalk deposits
(i.e. White Cliffs of Dover, limestone of pyramids). 6

Lifecycle
Simple asexual fission of radiolarian cells has been observed. Sexual
reproduction has not been confirmed but is assumed to occur; possible
gametogenesis has been observed in the form of "swarmers" being expelled from
swellings in the cell. Swarmers are formed from the central capsule after the
ectoplasm has been discarded. The central capsule sinks through the water
column to depths hundreds of meters greater than the normal habitat and swells,
eventually rupturing and releasing the flagellated cells. Recombination of
these cells, which are assumed to be haploid, to produce diploid "adults" has
not been observed however and is only inferred to occur. Comparisons of
standing crops within the water column and sediment trap samples have
ascertained that the average life span of radiolarians is about two weeks,
ranging from a few days to a few weeks. 7

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). 1600mybn for excavates, discricristales, rhizaria,
chromalveolates
2. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
3. ^ "Radiolaria". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Radiolaria
4. ^ http://www.bio.georgiasouthern.edu/Bio-home/Pratt/boo305.htm
5. ^ http://www.bio.georgiasouthern.edu/Bio-home/Pratt/boo305.htm
6. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
7. ^ http://www.ucl.ac.uk/GeolSci/micropal/radiolaria.html
8. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004). 1600mybn for excavates, discricristales,
rhizaria, chromalveolates (1600my)
9. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi
and Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise of
complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
  
1,960,000,000 YBN
14 15
321) Rhizaria Phylum "Foraminifera" evolve now.1 2
Ribosomal RNA shows
Rhizaria Phylum "Foraminifera" (also known as "Granuloreticulosea") evolve
now.

Forminifera are catagorized as amoeboid because they have pseudopods. 3

The Foraminifera, or forams for short, are a large group of amoeboid protists
with reticulating pseudopods, fine strands that branch and merge to form a
dynamic net. They typically produce a shell, or test, which can have either one
or multiple chambers, some becoming quite elaborate in structure. About 250 000
species are recognized, both living and fossil. They are usually less than 1 mm
in size, but some are much larger, and the largest recorded specimen reached 19
cm. As fossils, foraminifera are extremely useful. 4
Foraminifera are
haplodiploid. 5
Most have a kind of shell called a "test", which is composed of
calcium carbonate. 6

move by pseudopodia 7
most are marine 8
tests are major components of limestone
9
used to date marine sediments. 10

Foraminifera, especially the calcareous forms, have a fossil record stretching
back to the Cambrian (Lee, 1990), and are especially important
biostratigraphically. 11

b. Foraminiferans have a multi-chambered CaCO3 (calcium carbonate)
shell; thin pseudopods extend through holes. 12

Of the approximately 4000 living species of foraminifera the life cycles of
only 20 or so are known. There are a great variety of reproductive, growth and
feeding strategies, however the alternation of sexual and asexual generations
is common throughout the group and this feature differentiates the foraminifera
from other members of the Granuloreticulosea. An asexually produced haploid
generation commonly form a large proloculus (initial chamber) and are therefore
termed megalospheric. Sexually produced diploid generations tend to produce a
smaller proloculus and are therefore termed microspheric. Importantly in terms
of the fossil record, many foraminiferal tests are either partially dissolved
or partially disintegrate during the reproductive process.The planktonic
foraminifera Hastigerina pelagica reproduces by gametogenesis at depth, the
spines, septa and apertural region are resorbed leaving a tell-tale test.
Globigerinoides sacculiferproduces a sac-like final chamber and additional
calcification of later chambers before dissolution of spines occurs, this again
produces a distinctive test, which once gametogenesis is complete sinks to the
sea bed. 13 Since the meiosis products have to differentiate or mature into
gametes, meiosis does not result directly in gametes, these species are
haplodipoid (haplodiplontic).

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). has 1600mybn for excavates, discricristales, rhizaria,
chromalveolates
2. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
3. ^
http://microscope.mbl.edu/scripts/microscope.php?func=imgDetail&imageID=83
4. ^ "Foraminifera". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Foraminifera
5. ^ "Foraminifera". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Foraminifera
6. ^ "Foraminifera". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Foraminifera
7. ^ http://www.bio.georgiasouthern.edu/Bio-home/Pratt/boo305.htm
8. ^ http://www.bio.georgiasouthern.edu/Bio-home/Pratt/boo305.htm
9. ^ http://www.bio.georgiasouthern.edu/Bio-home/Pratt/boo305.htm
10. ^
http://www.bio.georgiasouthern.edu/Bio-home/Pratt/boo305.htm
11. ^ http://www.palaeos.com/Eukarya/Units/Rhizaria/Rhizaria.html
12. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
13. ^ http://www.ucl.ac.uk/GeolSci/micropal/foram.html
14. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004). has 1600mybn for excavates, discricristales,
rhizaria, chromalveolates (1600mybn)
15. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi
and Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise of
complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
  
1,900,000,000 YBN
4 5
66) Oldest Acritarch (eucaryote) fossils.1 2
These fossils are reported to be
both in Chuanlinggou Formation, China and in Russia.

Acritarchs, the name coined by Evitt in 1963 which means "of uncertain origin",
are an artificial group. The group includes any small (most are between 20-150
microns across), organic-walled microfossil which cannot be assigned to a
natural group. They are characterised by varied sculpture, some being spiny and
others smooth. They are believed to have algal affinities, probably the cysts
of planktonic eukaryotic algae. They are valuable Proterozoic and Palaeozoic
biostratigraphic and palaeoenvironmental tools. 3

FOOTNOTES
1. ^ http://www.ucl.ac.uk/GeolSci/micropal/acritarch.html
2. ^ Knoll AH (1992) The early evolution of eukaryotes: a
geological perspective. Science 256: 622-627
3. ^
http://www.ucl.ac.uk/GeolSci/micropal/acritarch.html
4. ^ http://www.ucl.ac.uk/GeolSci/micropal/acritarch.html
5. ^ Knoll AH (1992) The early evolution of eukaryotes: a
geological perspective. Science 256: 622-627
  
1,874,000,000 YBN
61) Oldest non-acritarch Eukaryote fossil Grypania spiralis (an alga 10 cm
long) from BIF in Michigan. Oldest algae fossil. 1 2

The date of this fossil
was originally 2100mybn, but Schneider measured the Marquette Range Supergroup
(MRS), A rhyolite in the Hemlock Formation, a mostly bimodal submarine
volcanic deposit that is laterally correlative with the Negaunee
Iron-formation, yields a sensitive high-resolution ion microprobe (SHRIMP) U-Pb
zircon age of 1874 ± 9 Ma. 3

In 1992, Han and Runnegar, finders of this fossil, compared the fossil to
Acetabularia, a single-celled green algae. If true, this would make Grypania
the oldest green algae fossil.



FOOTNOTES
1. ^ Han and Runnegar 1992. T.-M. Han and B. Runnegar, Megascopic eukaryotic
algae from the 2.1-billion-year-old Negaunee Iron-Formation, Michigan. Science
257 (1992), pp. 232-235 science_2100_han_runnegar_algal_cysts.pdf
2. ^ Schneider et al 2002. D.A. Schneider, M.E. Bickford, W.F.
Cannon, K.J. Schulz and M.A. Hamilton, Age of volcanic rocks and
syndepositional iron formations, Marquette Range Supergroup; implications for
the tectonic setting of Paleoproterozoic iron formations of the Lake Superior
region. Can. J. Earth Sci. 39 6 (2002), pp. 999-1012.
3. ^ Schneider et al 2002. D.A.
Schneider, M.E. Bickford, W.F. Cannon, K.J. Schulz and M.A. Hamilton, Age of
volcanic rocks and syndepositional iron formations, Marquette Range Supergroup;
implications for the tectonic setting of Paleoproterozoic iron formations of
the Lake Superior region. Can. J. Earth Sci. 39 6 (2002), pp. 999-1012.
  
1,800,000,000 YBN
46) End of the Banded Iron Formation Rocks.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
1,576,000,000 YBN
3
67) A eukaroyte cell forms a symbiotic relationship with cyanobacteria, which
form plastids (chloroplasts). Like mitochondria, these organelles copy
themselves and are not made by the cell DNA.1

Depending on their morphology
and function, plastids are commonly classified as chloroplasts, leucoplasts,
amyloplasts or chromoplasts. 2

FOOTNOTES
1. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).
2. ^ "Plastid". Wikipedia.
Wikipedia, 2008. http://en.wikipedia.org/wiki/Plastid
3. ^ S. Blair Hedges, "The Origin and Evolution of Model
Organisms", Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).,
see comments
  
1,513,000,000 YBN
1 2
221) First fungi evolve.1 2
Genetic comparison shows fungi evolving now. This
begins the fungi kingdom. Perhaps fungi evolved from the amoebozoa slime mold
line, because the sporangiophore (stalk) and sporangium (ball on top) of slime
molds look very similar to many fungi.

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (c1200)
  
1,500,000,000 YBN
4 5
323) First plant (single cell, similar to glaucophytes) evolves.1 2
Ribosomal
RNA place first plant (single cell, similar to glaucophytes) evolving here.
This begins the plant kingdom.

Cavelier-Smith and Ema E. -Y. Chao write: "Kingdom Plantae (sensuCavalier-Smith
1981) was originally defined as comprising all eukaryotes with chloroplasts
possessing an envelope of two membranes and mitochondria with (irregularly)
flat cristae. It originally included Viridaeplantae (green algae and
embryophyte or "higher" plants), Rhodophyta (red algae), and Glaucophyta (e.g.,
Cyanophora, Glaucocystis). It was argued that all three groups diverged from a
single primary symbiogenetic origin of plastids (Cavalier-Smith 1982). Both the
monophyly of plastids and that of Glaucophyta and Plantae long met unreasonably
strong opposition because of widespread false dogma that symbiogenesis is easy
and because the three taxa usually do not group together in 18S rRNA trees.
Now, however, derived features of all plastids compared with cyanobacteria and
numerous molecular trees have led to the acceptance of plastid monophyly
(Delwiche and Palmer 1998) and to the monophyly of glaucophyte algae.
Furthermore, a sister relation between red algae and Viridaeplantae is strongly
supported by concatenated protein trees for nuclei (Moreira et al. 2000;
Baldauf et al. 2000) and chloroplasts (Martin et al. 1998; Turmel et al. 1999).
The sister relationship between them and glaucophytes is convincingly, but
significantly more weakly, supported by the same trees. Thus the case of
Plantae shows that arguments from morphology and evolutionary considerations of
protein targeting during symbiogenesis (Cavalier-Smith 2000b) gave the correct
answer much more rapidly than single-gene trees, which still do not clearly
group all three taxa together. In all our trees in the present study (and the
recent tree of Edgcomb et al. 2002), Rhodophyta and Viridaeplantae are sisters,
but with weak support. Glaucophyta wander aimlessly from one place to another
in different trees." 3

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Thomas Cavalier-Smith and Ema E.
-Y. Chao, "Phylogeny of Choanozoa, Apusozoa, and Other Protozoa and Early
Eukaryote Megaevolution", Springer New York,
(2003). file:///home/ted/ulsf/docs/cav-smith_apusozoa_fulltext.html
4. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1609 mybn)
5. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (c1500)
  
1,492,000,000 YBN
2
173) Roper Group eukaryote algea microfossils.1
FOOTNOTES
1. ^ Andrew Knoll, "Life on a Young Planet: The first 3 Billion Years",
(Princeton, NJ: , 2003).
2. ^ Andrew Knoll, "Life on a Young Planet: The first 3
Billion Years", (Princeton, NJ: , 2003).
  
1,400,000,000 YBN
9 10 11
86) Glaucophyta evolve.1 2 3
Genetic comparison shows Phylum Glaucophyta
evolving at this time.
Some people catagorize Glaucophyta in the kingdom Plantae
instead of Protista, and label glaucophyta the most ancient living plants.

The glaucophytes, also referred to as glaucocystophytes or glaucocystids, are a
tiny group of freshwater algae. They are distinguished mainly by the presence
of cyanelles, primitive chloroplasts which closely resemble cyanobacteria and
retain a thin peptidoglycan wall between their two membranes. 4

It is thought that the green algae (from which the higher plants evolved), red
algae and glaucophytes acquired their chloroplasts from endosymbiotic
cyanobacteria. The other types of algae received their chloroplasts through
secondary endosymbiosis, by engulfing one of those types of algae along with
their chloroplasts. 5

The glaucophytes are of obvious interest to biologists studying the development
of chloroplasts: if the hypothesis that primary chloroplasts had a single
origin is correct, glaucophytes are closely related to both green plants and
red algae, and may be similar to the original alga type from which all of these
developed. 6

Glaucophytes have mitochondria with flat cristae, and undergo open mitosis
without centrioles. 7 Motile forms have two unequal flagella, which may have
fine hairs and are anchored by a multilayered system of microtubules, both of
which are similar to forms found in some green algae. 8

FOOTNOTES
1. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).
2. ^ Richard Dawkins, "The
Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
3. ^ Hwan Su Yoon,
Jeremiah D. Hackett, Claudia Ciniglia, Gabriele Pinto and Debashish, "A
Molecular Timeline for the Origin of Photosynthetic Eukaryotes", Molecular
Biology and Evolution, (2004).
4. ^ "Glaucophytes". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Glaucophytes
5. ^ "Glaucophytes". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Glaucophytes
6. ^ "Glaucophytes". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Glaucophytes
7. ^ http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P6064
8. ^ "Glaucophytes". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Glaucophytes
9. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). (c1500my)
10. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
(c1400)
11. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia, Gabriele Pinto and
Debashish, "A Molecular Timeline for the Origin of Photosynthetic Eukaryotes",
Molecular Biology and Evolution, (2004). (1558my)
  
1,400,000,000 YBN
4
197) Opisthokonts (posterior cilium) evolve from Unikonts (ancestrally only one
cilium). Opisthokonts have flat mitochondrial cristae and go on to form the
Animal and Fungi kingdoms.1 2

Thomas Cavalier-Smith and Ema E.-Y. Chao write:
"The term opisthokont, signifying "posterior cilium," was applied to animals,
Choanozoa, and Fungi because all three groups ancestrally had a single
posterior cilium (Cavalier-Smith 1987b). They were argued to be a clade because
they also were characterized (uniquely at the time) by flat, nondiscoid
mitochondrial cristae that were not irregularly inflated like the flat cristae
of Plantae (Cavalier-Smith 1987b). Four other characters also suggested that
animals and fungi were more closely related to each other than plants
(chitinous exoskeletons; storage of glycogen, not starch; absence of
chloroplasts; and UGA coding for tryptophane, not chain termination). However,
the first three were probably ancestral states for eukaryotes and the last
convergent, so the ciliary and cristal morphology were stronger indications.
Although early rRNA trees did not group animals and fungi together, the
opisthokonts are now consistently supported by all well-sampled rRNA trees and
trees using several or many proteins, as discussed above. Moreover a derived
12-amino acid insertion in translation elongation factor 1agr and three small
gaps in enolase clearly indicate that animals and fungi have a common ancestor
not shared with plants (or other bikonts) or Amoebozoa (Baldauf and Palmer
1993; Baldauf 1999). Thus opisthokonts are now well accepted as a robust clade
of eukaryotes (Patterson 1999)."3

FOOTNOTES
1. ^ J Mol Evol (2003) 56:540 563 Phylogeny of Choanozoa, Apusozoa, and Other
Protozoa and Early Eukaryote Megaevolution Thomas Cavalier-Smith, Ema E.-Y.
Chao /home/ted/ulsf/docs/cav-smith_apusozoa_fulltext.html
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
3. ^ J Mol Evol (2003) 56:540 563 Phylogeny of Choanozoa, Apusozoa,
and Other Protozoa and Early Eukaryote Megaevolution Thomas Cavalier-Smith, Ema
E.-Y. Chao /home/ted/ulsf/docs/cav-smith_apusozoa_fulltext.html
4. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
1,400,000,000 YBN
7 8
220) Amoebozoa (amoeba, slime molds) evolve now.1 2
Ribosomal RNA shows the
Protist Phylum Amoebozoa (also called Ramicristates) which includes amoeba and
slime molds evolving now.

The Amoebozoa are a major group of amoeboid protozoa, including the majority
that move by means of internal cytoplasmic flow. Their pseudopodia are
characteristically blunt and finger-like, called lobopodia. Most are
unicellular, and are common in soils and aquatic habitats, with some found as
symbiotes of other organisms, including several pathogens. The Amoebozoa also
include the slime moulds, multinucleate or multicellular forms that produce
spores and are usually visible to the unaided eye. 3

Mycetozoa are the slime molds.
4. Plasmodial Slime Molds 4
a. Plasmodial
slime molds exist as a plasmodium. (the earlier evolved acrasid cellular slime
molds exist as individual amoeboid cells.)
b. This diploid multinucleated
cytoplasmic mass creeps along, phagocytizing decaying plant material.
c.
Fan-shaped plasmodium contains tubules of concentrated cytoplasm in which
liquefied cytoplasm streams.
d. Under unfavorable environmental conditions
(e.g., drought), the plasmodium develops many sporangia
that produce
spores by meiosis.
e. When mature, spores are released and survive until
more favorable environmental conditions return;
then each releases a
haploid flagellated cell or an amoeboid cell.
f. Two flagellated or
amoeboid cells fuse to form diploid zygote that produces a multi-nucleated
plasmodium. 5

Nuclear division in giant amoebas (Peolobiont/Amoebozoa) is neither mitosis nor
binary fission, but incorporates aspects of both (Fig. 3-7). Chromosomes are
attached permanently to the nuclear membrane by their centromeres (MTOCs,
microtubule organizing centers), and the nuclear membrane remains intact
throughout division. After DNA duplication produces two chromatids, the point
of attachment, the MTOC duplicates or divides, and microtubules are assembled
between the two resulting MTOCs. Elongating microtubules form something akin to
a spindle within the nuclear membrane that pushes the daughter chromosomes
apart and elongate the membrane-bounded nucleus until it blebs in half in
something akin to binary fission. Simple assembly of microtubules accomplishes
the separation of daughter genomes in this simple nuclear division. In typical
eukaryotic mitosis, the separation of daughter chromosomes is accomplished by a
dual action, the disassembly of spindle fibers connecting the daughter
chromosome to the polar MTOC, and assembly of spindle fibers running pole to
pole. 6

amoeba haplodiploid?

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ "Amoebozoa". Wikipedia. Wikipedia,
2008. http://en.wikipedia.org/wiki/Amoebozoa
4. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
5. ^ http://www.sirinet.net/~jgjohnso/apbio30.html
6. ^
http://www.bio.ilstu.edu/Armstrong/syllabi/222book/Chapt%203.htm
7. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1587mybn)
8. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (c1400)
  
1,300,000,000 YBN
11 12 13 14 15
188) Green Algae, composed of the 2 Phlya Chlorophyta (volvox, sea lettuce) and
Charophyta (Spirogyra) evolve. 1 2 3 4 5 6

Genetic comparison shows Green
Algae, composed of the 2 Phlya Chlorophyta (volvox, sea lettuce) and Charophyta
(Spirogyra) evolving now.

The Green Algae are the large group of algae from which the embryophytes
(higher plants) emerged. As such they form a paraphyletic group, some people
placing them in the Plantae Kingdom, while others placing them in the Protist
Kingdom. 7

Almost all forms have chloroplasts. They are bound by a double membrane, so
presumably were acquired by direct endosymbiosis of cyanobacteria. 8

All green algae have mitochondria with flat cristae. When present flagella are
typically anchored by a cross-shaped system of microtubules, but these are
absent among the higher plants and charophytes. They usually have cell walls
containing cellulose, and undergo open mitosis without centrioles. Sexual
reproduction varies from fusion of identical cells (isogamy) to fertilization
of a large non-motile cell by a smaller motile one (oogamy). However, these
traits show some variation, most notably among the basal green algae, called
prasinophytes. 9

The first land plants most likely evolved from green algae. 10

Here is where the green algae separate from the ancestor of the first land
plants.

Spirogyra reproduce through conjugation, which either was inherited from
prokaryotes or evolved a second time in eukaryotes.

Some filamentous green algae (e.g. cladophora) are haplodiploid (alternate
between haploid and diploid cycles that both have mitosis).

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe,
"A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
3. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
4. ^ Daniel S. Heckman,1 David M.
Geiser,2 Brooke R. Eidell,1 Rebecca L. Stauffer,1 Natalie L. Kardos,
"Molecular Evidence for the Early Colonization of Land by Fungi and Plants",
Science 10 August 2001: Vol. 293. no. 5532, pp. 1129 - 1133 DOI:
10.1126/science.1061457, (2001).
5. ^ M. J. Benton, "The Fossil Record 2", (London; New
York: Chapman & Hall, 1993). fr2b
6. ^
http://www.ucmp.berkeley.edu/greenalgae/greenalgae.html
7. ^ "Green algae". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Green_algae
8. ^ "Green algae". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Green_algae
9. ^ "Green algae". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Green_algae
10. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
11. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L
Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (968mybn)
12. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (1300mybn)
13. ^ Daniel S. Heckman,1
David M. Geiser,2 Brooke R. Eidell,1 Rebecca L. Stauffer,1 Natalie L.
Kardos, "Molecular Evidence for the Early Colonization of Land by Fungi and
Plants", Science 10 August 2001: Vol. 293. no. 5532, pp. 1129 - 1133 DOI:
10.1126/science.1061457, (2001). (1061?)
14. ^ M. J. Benton, "The Fossil Record 2",
(London; New York: Chapman & Hall, 1993). fr2b (1650-800mybn)
15. ^
http://www.ucmp.berkeley.edu/greenalgae/greenalgae.html (1000my)
  
1,300,000,000 YBN
7 8
209) Red Algae (Rhodophyta) evolve now.1 2
Genetic comparison show Phylum
Rhodophyta (red algae) evolves now.

There are between 2500 and 6000 species in about 670 largely marine genera.

Many red algae are haplodiploid (alternate between haploid and diploid cycles
that both have mitosis).

The red algae (Rhodophyta) are a large group of mostly multicellular, marine
algae, including many notable seaweeds. Most of the coralline algae, which
secrete calcium carbonate and play a major role in building coral reefs, belong
here. Red algae such as dulse and nori are a traditional part of European and
Asian cuisine and are used to make certain other products like agar and food
additives. 3

Many red algae have multicellular stages but these lack differentiated tissues
and organs. Unlike most other algae, no cells with a flagellum are found in any
member of the group. Unicellular forms typically live attached to surfaces
rather than floating among the plankton, and both the larger female and smaller
male gametes are non-motile, so that most have a low chance of fertilization.
They have cell walls are made out of cellulose and thick gelatinous
polysaccharides, which are the basis for most of the industrial products made
from red algae.4

The chloroplasts of red algae are bound by a double membrane, like those of
green plants; both groups (Archaeplastida) probably share a common origin.
Their plastids formed by direct endosymbiosis of a cyanobacteria, and in red
algae are pigmented with chlorophyll a and various proteins called phycobilins,
which are responsible for their reddish color. Other algae that lack
chlorophyll b appear to have acquired their chloroplasts from red algae,
although their pigmentations are somewhat different.5

unicellular to multicellular (up to 1 m) mostly free-living but some parasitic
or symbiotic, with chloroplasts containing phycobilins. Cell walls made of
cellulose with mucopolysaccharides penetrated in many red algae by pores
partially blocked by proteins (complex referred to as pit connections). Usually
with separated phases of vegetative growth and sexual reproduction. Common and
widespread, ecologically important, economically important (source of agar). No
flagella. Ultrastructural identity: Mitochondria with flat cristae, sometimes
associated with forming faces of dictyosomes. Thylakoids single, with
phycobilisomes, plastids with peripheral thylakoid. During mitosis, nuclear
envelope mostly remains intact but some microtubules of spindle extend from
noncentriolar polar bodies through polar gaps in the nuclear envelope.
Synapomorphy: No clear-cut feature available; possibly pit connections
Composition: About 4,000 species. 6

CLASS Florideophyceae
CLASS Bangiophyceae
CLASS Rhodellophyceae

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
3. ^ "Rhodophyta". Wikipedia. Wikipedia,
2008. http://en.wikipedia.org/wiki/Rhodophyta
4. ^ "Rhodophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Rhodophyta
5. ^ "Rhodophyta". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Rhodophyta
6. ^ http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P9565
7. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1428mybn)
8. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (1300mybn)
  
1,280,000,000 YBN
1
187) A eukaryote rhodophyte (red alga) is enslaved by a chromealveolate
eukaryote to form a plastid in the chromealveolate. This kind of plastid is
presumably inherited by all other chromalveolates (brown algae, diatoms, water
molds, Dinoflagellata, Apicomplexa, ciliates) that have plastids.1 2 3

If this
red alga endosymbiosis occured only once, then all chromalveolates with
plastids inherited them and all without lost them. Ciliates presumably lost
any inherited plastids.

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
1,250,000,000 YBN
1
201) Oldest widely accepted Rhodophyta (red algae) fossils (Bangiomorpha
pubescens) from Hunting Formation, Somerset Island, arctic Canada. 1 2

This is
the oldest multicellular eukaryote fossil and the oldest fossil of a sexual
species found yet.

FOOTNOTES
1. ^ Science 1990 vol 250 Butterfield N. J. A. H. Knoll K. Swett 1990 A
bangiophyte red alga from the Proterozoic of Arctic Canada. Science 250:
104-107
  
1,100,000,000 YBN
7 8
75) Most ancient living fungi phylum "Microsporidia" evolves.1 2
Ribosomal RNA
shows most ancient living fungi phylum "Microsporidia" evolving now.

Microsporidia are parasites of animals, now considered to be extremely reduced
fungi. Most infect insects, but they are also responsible for common diseases
of crustaceans and fish, and have been found in most other animal groups,
including humans and other mammals which can be parasitized by species of
Encephalitozoon. Replication takes place within the host's cells, which are
infected by means of unicellular spores. These vary from 1-40 μm, making
them some of the smallest eukaryotes. They also have the shortest eukaryotic
genomes. 3

Microsporidia are unusual in lacking mitochondria, and also lack motile
structures such as flagella. The spores are protected by a layered wall
including proteins and chitin. Their interior is dominated by a unique coiled
structure called a polar tube (not to be confused with the polar filaments of
Myxozoa). In most cases there are two closely associated nuclei, forming a
diplokaryon, but sometimes there is only one. 4

Intracellular parasites, no mitochondria, ribosomes are unusual in being of
prokaryotic size (70S) 5 and lacking characteristic eukaryotic 5.8S ribosomal
RNA as a separate molecule in the microsporidia but is incorporated into the
23S r RNA. 6

binucleate haploid?

FOOTNOTES
1. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).
2. ^ Richard Dawkins, "The
Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
3. ^ "Microsporidia".
Wikipedia. Wikipedia, 2008. http://en.wikipedia.org/wiki/Microsporidia
4. ^ "Microsporidia". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Microsporidia
5. ^ Michael Sleigh, "Protozoa and Other Protists", (London; New York: Edward
Arnold, 1989). p236-237
6. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P5487&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

7. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). (>1460mybn)
8. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
(c1100mybn)

MORE INFO
[1] http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=93911
  
1,000,000,000 YBN
5 6
223) Fungi phylum "Chytridiomycota" evolves.1 2
Ribosomal RNA place fungi
phylum "Chytridiomycota" evolving now.

Many chytrids are haplodiploid (alternate between haploid and diploid cycles
that both have mitosis).

Chytridiomycota is a division of the Fungi kingdom and contains only one class,
Chytridiomycetes. The name refers to the chytridium (from the Greek,
chytridion, meaning "little pot"): the structure containing unreleased spores.
3
The chytrids are the most primitive of the fungi and are mostly saprobic
(feed on dead species, degrading chitin and keratin). Many chytrids are aquatic
(mostly found in freshwater). There are approximately 1,000 chytrid species, in
127 genera, distributed among 5 orders. Both zoospores and gametes of the
chytrids are mobile by their flagella, one whiplash per individual. The thalli
are coenocytic and usually form no true mycelium (having rhizoids instead).
Some species are unicellular. 4

FOOTNOTES
1. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).
2. ^ Richard Dawkins, "The
Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
3. ^ S. Blair Hedges,
"The Origin and Evolution of Model Organisms", Nature Reviews Genetics 3,
838-849; doi:10.1038/nrg929, (2002).
4. ^ S. Blair Hedges, "The Origin and Evolution of
Model Organisms", Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929,
(2002).
5. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). (1460mybn)
6. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
(1000mybn)

MORE INFO
[1]
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=71577&tree=0.1
[2] http://en.wikipedia.org/wiki/Chytridiomycota
  
1,000,000,000 YBN
2
324) Phylum Choanozoa (Mesomycetozoea/DRIPs, Choanoflagellates) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). moved to 1000my from 1200 (Dawkins)
2. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). moved to 1000my from 1200
(Dawkins)
  
1,000,000,000 YBN
325) The Choanozoan "Mesomycetozoaea" (DRIPs) evolve. 1
The Mesomycetozoea or
DRIP clade are a small group of protists, mostly parasites of fish and other
animals. One species, Rhinosporidium seeberi, infects birds and mammals,
including humans. They are not particularly distinctive morphologically,
appearing in host tissues as enlarged spheres or ovals containing spores, and
most were originally classified in various groups of fungi, protozoa, and
algae. However, they form a coherent group on molecular trees, closely related
to both animals and fungi and so of interest to biologists studying their
origins. 2

The name DRIP is an acronym for the first protozoa identified as members of the
group - Dermocystidium, the rosette agent, Ichthyophonus, and Psorospermium.
Cavalier-Smith later treated them as the class Ichthyosporea, since they were
all parasites of fish. Since other new members have been added, Mendoza et al.
suggested changing the name to Mesomycetozoea, which refers to their
evolutionary position. Note the name Mesomycetozoa (without a second e) is also
used to refer to this group, but Mendoza et al. use it as an alternate name for
the phylum Choanozoa. 3

Assemblage identified from molecular studies, mostly pathogens, a few genera,
no synapomorphy. Grouping formalized by Herr, Ajello, Taylor, Arseculeratne &
Mendoza, 1999. 4



FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ "Mesomycetozoea". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Mesomycetozoea
3. ^ "Mesomycetozoea". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Mesomycetozoea
4. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P8159&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

  
1,000,000,000 YBN
585) The Neoproterozoic (1.0-0.65Ga) is a period of dramatic global change and
quickening reef evolution. The appearance of heavily calcified microbial
elements (calcimicrobes; e.g. Girvanella and Renalcis) in the Tonian
(1.0-0.85Ga), coincident with the disappearance of conical elements and decline
in stromatolites, is a critical event. 1



FOOTNOTES
1. ^ http://gsa.confex.com/gsa/2002AM/finalprogram/abstract_38753.htm
  
967,000,000 YBN
3
97) A lens and light sensitive area evolve in unicellular eukaryote living
objects. This is the first proto eye.

The eye spot probably evolved from a
plastid, and plastids may have only formed symbiotic relationships in
euglenozoa much later, since the plastids in euglenozoa are enclosed in 3
membranes (the same as chloroplasts in plants), they are thought to have been
formed from captured green algae which evolve much later. 1 2

FOOTNOTES
1. ^
http://www.sidwell.edu/us/science/vlb5/Labs/Classification_Lab/Eukarya/Protista/
Euglenozoa/

2. ^ THOMAS CAVALIER-SMITH, "Economy, Speed and Size Matter: Evolutionary
Forces Driving Nuclear Genome Miniaturization and Expansion", * Oxford
Journals * Life Sciences * Annals of Botany * Volume 95, Number
1 *, (2005).
3. ^ my own estimate based on where euglenozoa genetically appear to
evolve
  
900,000,000 YBN
11 12
326) The Choanozoans "Choanoflagellates" and "Acanthoecida" evolve. 1 2 3 4 5 6

The choanoflagellates are a group of flagellate protozoa. They are considered
to be the closest relatives of the animals, and in particular may be the direct
ancestors of sponges. 7

Each choanoflagellate has a single flagellum, surrounded by a ring of hairlike
protrusions called microvilli, forming a cylindrical or conical collar (choanos
in Greek). The flagellum pulls water through the collar, and small food
particles are captured by the microvilli and ingested. It also pushes
free-swimming cells along, as in animal sperm, whereas most other flagellates
are pulled by their flagella. 8

Most choanoflagellates are sessile, with a stalk opposite the flagellum. A
number of species are colonial, usually taking the form of a cluster of cells
on a single stalk. Of special note is Proterospongia, which takes the form of a
glob of cells, of which the external cells are typical flagellates with
collars, but the internal cells are non-motile. 9

The choanocytes (also known as "collared cells") of sponges have the same basic
structure as choanoflagellates. Collared cells are occasionally found in a few
other animal groups, such as flatworms. These relationships make colonial
choanoflagellates a plausible candidate as the ancestors of the animal kingdom.
10

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=114293
3. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L
Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
4. ^
http://microscope.mbl.edu/scripts/protist.php?func=integrate&myID=P2691&chinese_
flag=&system=&version=&documentID=&excludeNonLinkedIn=&imagesOnly=

5. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1513 (drips?) and 1450 choano)
6. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
(1000 drips and 900 choano)
7. ^ "Choanoflagellate". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Choanoflagellate
8. ^ "Choanoflagellate". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Choanoflagellate
9. ^ "Choanoflagellate". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Choanoflagellate
10. ^ "Choanoflagellate". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Choanoflagellate
11. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1513 (drips?) and 1450 choano)
12. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
(1000 drips and 900 choano)
  
855,000,000 YBN
1 2 3
286) A key step in metazoan multicellularity evolves, where a zygote produces
differentiated cells that stick together to form one organism.1 2

Metazoan
multicellularity appears to be different from colonialism (where independent
cells of the same species work together and function as one unit), because one
zygote produces all the cells in the organism.

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe,
"A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1351my)
3. ^ Ted Huntington, compromise between
Dawkins and Hedges, et al. (compromise=1055)
  
850,000,000 YBN
6 7 8
81) First animal and first metazoan evolve. Metazoans are multicellular, but
their cells perform different functions and originate from one cell(?). This
is`also the beginning of the Animal Subkingdom "Radiata", species with radial
symmetry. These are the sponges. There are only 3 kinds of metazoans: sponges,
cnidarians, and bilaterians (which include all insects and vertibrates).
Sponges are the first organisms whose DNA codes for more than one kind of cell.
Sponges have 3 different cell types. Some cells form a body wall, some digest
food, some form a skeletal frame.1 2 3

All sponge cells are totipotent and are
capable of regrowing a new sponge. 4
The two major subkingdoms of the Kingdom
Animalia are Radiata (the radiates) and Bilateria (the bilaterians). 5

FOOTNOTE
S
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
3. ^ S
Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A molecular
timescale of eukaryote evolution and the rise of complex multicellular life",
BMC Evolutionary Biology 2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
4. ^ Richard
Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
5. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=11166
6. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). (c850my)
7. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason
L Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1351my)
8. ^ Richard Cowen, "History of Life",
(Malden, MA: Blackwell, 2005). (600?)
  
850,000,000 YBN
2
101) First homeobox, or "hox" genes evolve. These genes regulate the building
of major body parts.1


FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^ same as
sponge
  
850,000,000 YBN
5 6 7 8
224) Genetic comparison shows Fungi division "Zygomycota" (bread molds, pin
molds, microsporidia,...) evolving now.1 2 3 4


FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke
R. Eidell,1 Rebecca L. Stauffer,1 Natalie L. Kardos, "Molecular Evidence for
the Early Colonization of Land by Fungi and Plants", Science 10 August
2001: Vol. 293. no. 5532, pp. 1129 - 1133 DOI: 10.1126/science.1061457,
(2001).
3. ^ S. Blair Hedges and Sudhir Kumar, "Genomic clocks and evolutionary
timescales", Trends in Genetics Volume 19, Issue 4 , April 2003, Pages
200-206, (2003).
4. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
5. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason
L Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1250mybn)
6. ^ Daniel S. Heckman,1 David M. Geiser,2
Brooke R. Eidell,1 Rebecca L. Stauffer,1 Natalie L. Kardos, "Molecular
Evidence for the Early Colonization of Land by Fungi and Plants", Science 10
August 2001: Vol. 293. no. 5532, pp. 1129 - 1133 DOI:
10.1126/science.1061457, (2001). (1107mybn)
7. ^ S. Blair Hedges and Sudhir Kumar,
"Genomic clocks and evolutionary timescales", Trends in Genetics Volume 19,
Issue 4 , April 2003, Pages 200-206, (2003). (1107mybn)
8. ^ Richard Dawkins, "The
Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004). (c850m)
  
780,000,000 YBN
8
79) Animal Phylum "Placozoa" evolves.1 2
Placozoans look like amoebas but are
multicellular.3

There is only one known species, "Tricoplax adhaerens", and one other potential
species "Tricoplax reptans" in the entire Placozoa phylum.4

Putative eggs have been observed, but they degrade at the 32-64 cell stage.
Neither embryonic development nor sperm have been observed, however Trichoplax
genomes show evidence of sexual reproduction.5 Asexual reproduction by binary
fission is the primary mode of reproduction observed in the lab. 6

The haploid number of chromosomes is six. It has the smallest amount of DNA yet
measured for any animal with only 50 megabases (80 femtograms per cell). A
trichoplax genome project is currently underway. 7

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=11212&tree=0.1
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
4. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
5. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=11212&tree=0.1
6. ^ "Placozoa". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Placozoa
7. ^ "Placozoa". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Placozoa
8. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
750,000,000 YBN
2
83) Animal Phlyum Ctenophora (comb jellies) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c750)
  
750,000,000 YBN
4 5 6
225) Genetic comparison shows Fungi division "Glomeromycota" (Arbuscular
mycorrhizal fungi) evolving now.1 2 3


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms",
Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).
3. ^ S Blair Hedges,
Jaime E Blair, Maria L Venturi and Jason L Shoe, "A molecular timescale of
eukaryote evolution and the rise of complex multicellular life", BMC
Evolutionary Biology 2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
4. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
(c750mybn)
5. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). (c1460 to
1210mybn)
6. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (estimate that between 947 and 968)
  
700,000,000 YBN
4 5 6
82) First cnidarians (coelantrates), jellyfish evolves. Jellyfish have photon
detecting cells and a lens made of ?.1 2 3


FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
3. ^ S
Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A molecular
timescale of eukaryote evolution and the rise of complex multicellular life",
BMC Evolutionary Biology 2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
4. ^ Richard
Cowen, "History of Life", (Malden, MA: Blackwell, 2005). (580my)
5. ^ Richard Dawkins,
"The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004). (c700my)
6. ^ S
Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A molecular
timescale of eukaryote evolution and the rise of complex multicellular life",
BMC Evolutionary Biology 2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
(1298my)
  
700,000,000 YBN
8 9 10
226) The second largest group of Fungi, the phylum "Basidiomycota" (most
mushrooms, rusts, club fungi) evolve.1 2 3

Genetic comparison shows the second
largest group of Fungi, the phylum "Basidiomycota" (most mushrooms, rusts, club
fungi) evolving now.4 5 6

The Division Basidiomycota is a large taxon within the Kingdom Fungi that
includes those species that produce spores in a club-shaped structure called a
basidium. Essentially the sibling group of the Ascomycota, it contains some
30,000 species (37% of the described fungi)7

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ S. Blair Hedges, "The Origin and Evolution of
Model Organisms", Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929,
(2002).
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
4. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe,
"A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
5. ^ S. Blair Hedges, "The Origin and Evolution of
Model Organisms", Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929,
(2002).
6. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
7. ^ "Basidiomycota". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Basidiomycota
8. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (968my)
9. ^ S. Blair Hedges, "The Origin and
Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849 (2002);
doi:10.1038/nrg929, (2002). (1210my)
10. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (700my)
  
700,000,000 YBN
8 9 10
227) The largest Fungi phylum "Ascomycota" (yeasts, truffles, Penicillium,
morels, sac fungi) evolves.1 2 3

Genetic comparison shows the largest Fungi
phylum "Ascomycota" (yeasts, truffles, Penicillium, morels, sac fungi) evolving
now.4 5 6
47,000 described species.7

FOOTNOTES
1. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe, "A
molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
2. ^ S. Blair Hedges, "The Origin and Evolution of
Model Organisms", Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929,
(2002).
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
4. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe,
"A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
5. ^ S. Blair Hedges, "The Origin and Evolution of
Model Organisms", Nature Reviews Genetics 3, 838-849; doi:10.1038/nrg929,
(2002).
6. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
7. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason L Shoe,
"A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
8. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi
and Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise of
complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1009my)
9. ^ S. Blair Hedges, "The Origin and
Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849 (2002);
doi:10.1038/nrg929, (2002). (1140my)
10. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (700my)
  
700,000,000 YBN
7 8 9 10 11 12
228) Genetic comparison shows the largest and second largest lines of Fungi
(Ascomycota and Basidiomycota) splitting now.1 2 3 4 5 6


FOOTNOTES
1. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke R. Eidell,1 Rebecca L.
Stauffer,1 Natalie L. Kardos, "Molecular Evidence for the Early Colonization
of Land by Fungi and Plants", Science 10 August 2001: Vol. 293. no. 5532, pp.
1129 - 1133 DOI: 10.1126/science.1061457, (2001).
2. ^ S. Blair Hedges and Sudhir
Kumar, "Genomic clocks and evolutionary timescales", Trends in Genetics
Volume 19, Issue 4 , April 2003, Pages 200-206, (2003).
3. ^ S Blair Hedges, Jaime E
Blair, Maria L Venturi and Jason L Shoe, "A molecular timescale of eukaryote
evolution and the rise of complex multicellular life", BMC Evolutionary Biology
2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
4. ^ S. Blair Hedges, "The Origin and
Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849;
doi:10.1038/nrg929, (2002).
5. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
6. ^ Emmanuel J. P. Douzery, Elizabeth A. Snell, Eric
Bapteste, Frédéric Delsuc, "The timing of eukaryotic evolution: Does a
relaxed molecular clock reconcile proteins and fossils?", (PNAS) Proceedings of
the National Academy of Sciences of the UNites States of America, (2001).
7. ^ Daniel
S. Heckman,1 David M. Geiser,2 Brooke R. Eidell,1 Rebecca L. Stauffer,1
Natalie L. Kardos, "Molecular Evidence for the Early Colonization of Land by
Fungi and Plants", Science 10 August 2001: Vol. 293. no. 5532, pp. 1129 -
1133 DOI: 10.1126/science.1061457, (2001). (1208my)
8. ^ S. Blair Hedges and Sudhir
Kumar, "Genomic clocks and evolutionary timescales", Trends in Genetics
Volume 19, Issue 4 , April 2003, Pages 200-206, (2003). (1208my)
9. ^ S Blair Hedges,
Jaime E Blair, Maria L Venturi and Jason L Shoe, "A molecular timescale of
eukaryote evolution and the rise of complex multicellular life", BMC
Evolutionary Biology 2004, 4:2 doi:10.1186/1471-2148-4-2, (2004). (968my)
10. ^ S.
Blair Hedges, "The Origin and Evolution of Model Organisms", Nature Reviews
Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). (1210my)
11. ^ Richard Dawkins,
"The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004). (700my)
12. ^
Emmanuel J. P. Douzery, Elizabeth A. Snell, Eric Bapteste, Frédéric Delsuc,
"The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile
proteins and fossils?", (PNAS) Proceedings of the National Academy of Sciences
of the UNites States of America, (2001). (727my)
  
680,000,000 YBN
4 5 6
222) Genetic comparison shows the Class of Ascomycota Fungi called
"Archaeascomycetes" (fission yeast, pneumonia fungus) evolving now.1 2 3

FOOTNO
TES
1. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms", Nature
Reviews Genetics 3, 838-849; doi:10.1038/nrg929, (2002).
2. ^ S Blair Hedges, Jaime E
Blair, Maria L Venturi and Jason L Shoe, "A molecular timescale of eukaryote
evolution and the rise of complex multicellular life", BMC Evolutionary Biology
2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
3. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004).
4. ^ S. Blair Hedges, "The Origin
and Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849 (2002);
doi:10.1038/nrg929, (2002). (1140my)
5. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi
and Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise
of complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1009my)
6. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (c700)

MORE INFO
[1] http://tolweb.org/tree?group=Ascomycota&contgroup=Fungi
[2] http://en.wikipedia.org/wiki/Ascomycota
  
650,000,000 YBN
69) Start of Varanger Ice Age (650-590 mybn).1
FOOTNOTES
1. ^ Proc. Ntl. Acad. Sci. USA Vol 91, pp 6743-6750, July 1994 "Proterozoic
and Early Cambrian protists: Evidence for accelerating evolutionary
tempo" Andrew H Knoll
  
650,000,000 YBN
4 5 6
229) Genetic comparison shows the Ascomycota Fungi "Hemiascomycetes" evolving
now.1 2 3

FOOTNOTES
1. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke R. Eidell,1 Rebecca L.
Stauffer,1 Natalie L. Kardos, "Molecular Evidence for the Early Colonization
of Land by Fungi and Plants", Science 10 August 2001: Vol. 293. no. 5532, pp.
1129 - 1133 DOI: 10.1126/science.1061457, (2001).
2. ^ S. Blair Hedges, "The Origin
and Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849;
doi:10.1038/nrg929, (2002).
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
4. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke
R. Eidell,1 Rebecca L. Stauffer,1 Natalie L. Kardos, "Molecular Evidence for
the Early Colonization of Land by Fungi and Plants", Science 10 August
2001: Vol. 293. no. 5532, pp. 1129 - 1133 DOI: 10.1126/science.1061457,
(2001). (1085my)
5. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms",
Nature Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). (1090my)
6. ^
Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company,
2004). (<700my)

MORE INFO
[1] http://tolweb.org/tree?group=Ascomycota&contgroup=Fungi
[2] http://en.wikipedia.org/wiki/Ascomycota
  
630,000,000 YBN
7 8
91) First bilateral (has 2 sided symmetry) species evolves. Animal phylum
Acoelomorpha (acoela flat worms and nemertodermatida) evolves. 1 2 3
This
begins the Subkingdom "Bilateria". 4

lack a digestive track, anus and coelom.
5 6

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=201049&tree=0.1
3. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
4. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=201049&tree=0.1
5. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
6. ^ "Acoelomorpha". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Acoelomorpha
7. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). (630my)
8. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell,
2005). (575 (fossil is older)
  
600,000,000 YBN
4 5 6
231) Basidiomycota Fungi "Ustilaginomycetes" (corn smut fungus) and
"Hymenomycetes" (white rot fungus) evolve.1 2 3

FOOTNOTES
1. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke R. Eidell,1 Rebecca L.
Stauffer,1 Natalie L. Kardos, "Molecular Evidence for the Early Colonization
of Land by Fungi and Plants", Science 10 August 2001: Vol. 293. no. 5532, pp.
1129 - 1133 DOI: 10.1126/science.1061457, (2001).
2. ^ S. Blair Hedges, "The Origin
and Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849;
doi:10.1038/nrg929, (2002).
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
4. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke
R. Eidell,1 Rebecca L. Stauffer,1 Natalie L. Kardos, "Molecular Evidence for
the Early Colonization of Land by Fungi and Plants", Science 10 August
2001: Vol. 293. no. 5532, pp. 1129 - 1133 DOI: 10.1126/science.1061457,
(2001). (966my)
5. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms",
Nature Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002). (970my)
6. ^
Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company,
2004). (<700my)

MORE INFO
[1] http://tolweb.org/tree?group=Ascomycota&contgroup=Fungi
[2] http://en.wikipedia.org/wiki/Ascomycota
  
590,000,000 YBN
70) End of Varanger Ice Age (650-590 mybn).1
FOOTNOTES
1. ^ Proc. Ntl. Acad. Sci. USA Vol 91, pp 6743-6750, July 1994 "Proterozoic
and Early Cambrian protists: Evidence for accelerating evolutionary
tempo" Andrew H Knoll
  
590,000,000 YBN
3
93) Protostomes evolve. Many phyla evolve at this time. Protostomes include
the 3 infrakingdoms Ecdysozoa (a variety of worms and the arthropods {a huge
group including all insects and crustaceans}), Platyzoa (rotifers and
flatworms), and Lophotrochozoa (brachiopods {clams}, molluscs {snails}, and a
variety of worms). 1 2


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=198701
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004). (590my)
  
580,000,000 YBN
94) Earliest animal fossil from Doushantuo formation in China.1

FOOTNOTES
1. ^
http://biocrs.biomed.brown.edu/Books/Chapters/Ch%2019/Fossil-Embryos/NYtimes-mic
rofossils.html

  
580,000,000 YBN
2
165) Earliest bilaterian fossil, Vernanimalcula, 178 um in length, from
Doushantuo Formation, China. First fossil of organism with bilateral symmetry,
mouth, digestive track, gut and anus.1


FOOTNOTES
1. ^ Science, Vol 305, Issue 5681, 218-222, 9 July 2004 Small Bilaterian
Fossils from 40 to 55 Million Years Before the Cambrian Jun-Yuan Chen,1,2*
David J. Bottjer,3* Paola Oliveri,4 Stephen Q. Dornbos,3 Feng Gao,4 Seth
Ruffins,4 Huimei Chi,5 Chia-Wei Li,6 Eric H. Davidson4
http://www.sciencemag.org/cgi/content/full/sci;305/5681/218
2. ^ Science, Vol 305, Issue 5681, 218-222, 9 July 2004 Small Bilaterian
Fossils from 40 to 55 Million Years Before the Cambrian Jun-Yuan Chen,1,2*
David J. Bottjer,3* Paola Oliveri,4 Stephen Q. Dornbos,3 Feng Gao,4 Seth
Ruffins,4 Huimei Chi,5 Chia-Wei Li,6 Eric H. Davidson4
http://www.sciencemag.org/cgi/content/full/sci;305/5681/218
  
580,000,000 YBN
4 5
318) Protostome Infrakingdom Ecdysozoa evolves. Ecdysozoa are animals that
molt (lose their outer skins) as they grow.1 2
Ecdysozoa include:
the Phylum
"Chaetognatha" (Arrow Worms),
the Superphylum "Aschelminthes", containing the 5
Phlya:
"Kinorhyncha" (kinorhynchs)
"Loricifera" (loriciferans)
"Nematoda" (round worms)
"Nematomorpha"
(horsehair worms),
"Priapulida" (priapulids)
the Superphlyum "Panarthropoda" containing the 3
Phyla:
"Arthropoda" (arthropods: insects, shell fish)
"Onychophora" (onychophorans)
"Tardigrada"
(tardigrades) 3


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
3. ^
http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=198710
4. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). (c580)
5. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell,
2005). (560)
  
575,000,000 YBN
107) Start of fossils in Ediacaran fauna near Adelaide, Australia.1
FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
574,000,000 YBN
2
96) First neuron, nerve cell, and nervous system evolves in bilaterians.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
(presumably)
2. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
(presumably)
  
570,000,000 YBN
95) Fluid filled cavity, coelom evolves in early bilaterians.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
570,000,000 YBN
105) Deuterostomes evolve. This is the beginning of the Subkingdom
Deuterostomia and Infrakingdom "Coelomopora" (Ambulacraria) with the two Phyla
"Hemichordata" (acorn worms) and "Echinodermata" (sea cucumbers, sea urchins,
starfish). 1 2




FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=198706
  
570,000,000 YBN
2
311) Ecdysozoa phylum Chaetognatha (Arrow Worms) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (570)
  
570,000,000 YBN
345) Deuterostome Coelomorpha Phylum Hemichordonia (acorn worms) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
570,000,000 YBN
346) Deuterostome Coelomorpha Phylum Echinodermata (sea cucumbers, sea urchins,
sand dollars, star fish) evolves.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
565,000,000 YBN
98) First circulatory system and red blood cells evolve in bilaterian worms.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
565,000,000 YBN
4
327) Infrakingdom Platyzoa (includes Superphylum Gnathifera {gnathiferans},
Phylum Gastrotricha {gastrotrichs}, and Phylum Platyhelminthes {flatworms})
evolve. 1 2 3


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=126691
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
4. ^ Richard Dawkins, "The Ancestor's Tale", (Boston,
MA: Houghton Mifflin Company, 2004). (565)
  
565,000,000 YBN
347) Deuterostome Phylum Chordata evolves.1 Chordata is a very large group
that contains all fish, amphibians, reptiles and mammals.


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
565,000,000 YBN
348) Deuterstome Chordata Subphylum Tunicata (tunicates {sea squirts})
evolves.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
562,000,000 YBN
99) Segmentation evolves.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
561,000,000 YBN
100) Filter feeding, filtering food and oxygen from water through a digestive
system, evolves in segmented worms.1


FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
560,000,000 YBN
117) Oldest fossil of chordate, Ediacaran fossil.1
FOOTNOTES
1. ^ http://news.bbc.co.uk/1/hi/sci/tech/3208583.stm
  
560,000,000 YBN
2
330) The two Ecdysozoa Superphyla Ashelminthes (round worms, horsehair worms,
priapulids) and Pananthropoda (arthropods, onychophorans, tardigrades)
separate. 1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c550)

MORE INFO
[1] http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=126686
  
560,000,000 YBN
349) Deuterstome Chordata Subphylum Cephalochordata (lancelets) evolves.1
This is the first fish.


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
550,000,000 YBN
3
328) Ecdysozoa Superphylum "Ashelminthes" evolves. This includes the 5 Phyla:

Kinorhyncha (kinorhynchs),
Loricifera (loriciferans),
Nematoda (round worms),
Nematomorpha (horsehair
worms),
Priapulida (priapulids). 1 2


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=126691
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004). (c550)
  
550,000,000 YBN
3
329) Platyzoa Superphylum "Gnathifera" evolves. This includes the 5 Phyla:
Gnat
hostomulida (gnathostomulids),
Cycliophora (cycliophorans),
Micrognathozoa,
Rotifera (rotifers),
Acanthocephala (acanthocephalans). 1 2


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=126686
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004). (c550)
  
547,000,000 YBN
1 2
331) The Protostome Infrakingdom Lophotrochozoa evolves. This includes
brachiopods, bryozoans, clams, squids and octopuses (cephalopods), and snails.1
2

This infrakingdom is made of:
Superphylum Lophophorata,
Phylum Bryozoa (bryozoans),
Phylum Entoprocta
(entoprocts),
Superphylum Eutrochozoa.

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Elizabeth Pennisi, "Drafting a Tree", Science, (2003). (550)
  
547,000,000 YBN
2
332) The Lophotrochozoa Superphylum Lophophorata evolves. This includes the
two Phyla Phoronida (phoronids) and Brachiopoda (brachiopods {clams, oysters,
muscles}).1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c547)
  
547,000,000 YBN
2
333) The Lophotrochozoa Phyla Phoronida (phoronids) evolves. 1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c547)
  
547,000,000 YBN
2
334) The Lophotrochozoa Phylum Brachiopoda (brachiopods {clams, oysters,
muscles}) evolves.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c547)
  
545,000,000 YBN
2
335) The Lophotrochozoa Phylum Entoprocta (entoprocts) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c545)
  
543,000,000 YBN
53) End Precambrian Eon, start Phanerozoic Eon. End Proterozoic Era, start
Paleozoic Era.1 2


FOOTNOTES
1. ^ The geological Society of America ucmp.berkeley.edu
2. ^ Richard Cowen, "History of Life",
(Malden, MA: Blackwell, 2005).
  
543,000,000 YBN
2
104) The Platyzoa Phyla Platyhelminthes (flatworms) and Gastrotricha
(gastrotrichs) evolve. 1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c543)
  
543,000,000 YBN
120) Start Cambrian period (543-490 mybn).1

FOOTNOTES
1. ^ The geological Society of America
  
543,000,000 YBN
2
336) The Lophotrochozoa Phylum Bryozoa (Bryozoans or moss animals) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c543)
  
543,000,000 YBN
2
337) The Ecdysozoa Superphylum Panarthropoda (Arthropods, Onychophora,
Tardigrada) evolves.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c543)
  
543,000,000 YBN
2
338) The Ecdysozoa Phylum Arthropoda (insects, crustaceans) evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c543)
  
543,000,000 YBN
2
339) The Ecdysozoa Phylum Onychophora (onychophorans) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c543)
  
543,000,000 YBN
2
340) The Ecdysozoa Phylum Tardigrada (tardigrades) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c543)
  
542,000,000 YBN
131) First shell (or skeleton) evolves.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
541,000,000 YBN
3
102) The Lophotrochozoa Superphylum Eutrochozoa (molluscs, ribbon, peanut,
spoon, and segmented worms) evolves. 1 2


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=201563
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004). (c541)
  
541,000,000 YBN
132) Archaeocyatha (early sponges) evolve.1

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
541,000,000 YBN
2
341) The Lophotrochozoa Phylum Nemertea (ribbon worms) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c541)
  
540,000,000 YBN
133) Earliest trilobite fossil.1 2 3 4

FOOTNOTES
1. ^ Xiao, S., Yang, Z. & Knoll, A. H. Nature 391, 553-558 (1998). Article
ISI ChemPort
http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v391/n6667/ful
l/391553a0_fs.html
(not clear that these are trilobite...this needs to be
checked)
2. ^ http://www.nature.com/nature/journal/v427/n6971/full/427205a.html (here
it is claimed they are trilobite embryos)
3. ^ science_266_5185_oldest_trilo.pdf has
510my
4. ^ http://www.ucmp.berkeley.edu/arthropoda/trilobita/trilobitafr.html
  
539,000,000 YBN
2
342) The Lophotrochozoa Phylum Mollusca (brachiopods, bryozoans, clams,
mussels, squids and octopuses {cephalopods}, and snails) evolves.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c539)
  
537,000,000 YBN
2
343) The Lophotrochozoa Phylum Annelida (segmented worms) evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c537)
  
537,000,000 YBN
2
344) The Lophotrochozoa Phylum Sipuncula (peanut worms) evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004). (c537)
  
530,000,000 YBN
350) Deuterstome Chordata Subphylum Vertebrata evolves.1 This Subphylum
contains most fish, all amphibians, reptiles, and mammals.


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
530,000,000 YBN
351) Subphylum Vertebrata jawless fish (agnatha) evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
530,000,000 YBN
4 5
386) Oldest fossil vertebrate and fish.1 2
Haikouichthys ercaicunensis: About
25 mm in length.3

FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
2. ^ http://news.bbc.co.uk/1/hi/sci/tech/504776.stm
3. ^ http://news.bbc.co.uk/1/hi/sci/tech/504776.stm
4. ^ http://www.uky.edu/KGS/education/timeline2.htm
5. ^ http://news.bbc.co.uk/1/hi/sci/tech/504776.stm
  
520,000,000 YBN
205) Dinoflagellate biological markers measured in Kopli quarry, Tallinn,
Estonia.1 2


FOOTNOTES
1. ^ Science, Vol 281, Issue 5380, 1168-1170 , 21 August 1998
2. ^ Biogeochemical
Evidence for Dinoflagellate Ancestors in the Early Cambrian J. Michael
Moldowan, * Nina M. Talyzina
  
507,000,000 YBN
3
140) Aysheaia (onychophoran, also described as lobopod) fossil, from Burgess
shale.1 2

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^
http://www.nmnh.si.edu/paleo/shale/payshia.htm
3. ^
http://www.burgess-shale.bc.ca/intro.htmhttp://www.palaeos.com/Paleozoic/Cambria
n/Sirius_Passet.htm

  
507,000,000 YBN
145) Priapulid worm fossils of Burgess Shale.1
FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
507,000,000 YBN
146) Opabinia fossils of Burgess Shale.1
FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
507,000,000 YBN
147) Animalocaris fossils of Burgess Shale.1
FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
507,000,000 YBN
149) Marrella (Arthropod) fossils in Burgess Shale.1 2

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^
http://www.nmnh.si.edu/paleo/shale/pmarella.htm
  
505,000,000 YBN
4 5
74) Oldest fossil of an artropod moulting.1 2 3
FOOTNOTES
1. ^ http://www.nature.com/nature/journal/v429/n6987/full/429040a.html
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
3. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and Jason
L Shoe, "A molecular timescale of eukaryote evolution and the rise of complex
multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
4. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004). (780my)
5. ^ S Blair Hedges, Jaime E
Blair, Maria L Venturi and Jason L Shoe, "A molecular timescale of eukaryote
evolution and the rise of complex multicellular life", BMC Evolutionary Biology
2004, 4:2 doi:10.1186/1471-2148-4-2, (2004). (c1300my)
  
500,000,000 YBN
4 5 6
230) Ascomycota Fungi "Pyrenomycetes" (head scab fungus, orange bread mold,
rice blast fungus) and "Plectomycetes" (aspergillus, penicilin fungus,
coccidiodomycosis fungus) evolve.1 2 3

FOOTNOTES
1. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke R. Eidell,1 Rebecca L.
Stauffer,1 Natalie L. Kardos, "Molecular Evidence for the Early Colonization
of Land by Fungi and Plants", Science 10 August 2001: Vol. 293. no. 5532, pp.
1129 - 1133 DOI: 10.1126/science.1061457, (2001).
2. ^ S. Blair Hedges, "The Origin
and Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849;
doi:10.1038/nrg929, (2002).
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
4. ^ Daniel S. Heckman,1 David M. Geiser,2 Brooke
R. Eidell,1 Rebecca L. Stauffer,1 Natalie L. Kardos, "Molecular Evidence for
the Early Colonization of Land by Fungi and Plants", Science 10 August
2001: Vol. 293. no. 5532, pp. 1129 - 1133 DOI: 10.1126/science.1061457,
(2001). (670my)
5. ^ S. Blair Hedges, "The Origin and Evolution of Model Organisms",
Nature Reviews Genetics 3, 838-849 (2002); doi:10.1038/nrg929, (2002).
(670+-70my)
6. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004). (<700my)

MORE INFO
[1] http://tolweb.org/tree?group=Ascomycota&contgroup=Fungi
[2] http://en.wikipedia.org/wiki/Ascomycota
  
490,000,000 YBN
121) Start Ordovician (490-443 mybn), end Cambrian period (543-490 mybn).1

FOOTNOTES
1. ^ The geological Society of America
  
475,000,000 YBN
11 12 13
90) Genetic comparison shows the ancestor of all plants (Kingdom Plantae)
evolving at this time (in the view that algae are protists and not plants).1 2
3 4 5

Genetic comparison shows the ancestor of all plants (Kingdom Plantae)
evolving at this time (in the view that algae are single and multicellular
protists and not plants).6 7 8 9 10

FOOTNOTES
1. ^ Seung Yeo Moon-van der Staay, Rupert De Wachter, Daniel Vaulot, "Oceanic
18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity",
Nature, (2001).
2. ^ Elizabeth Pennisi, "Drafting a Tree", Science, (2003).
3. ^ Richard
Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin Company, 2004).
4. ^ S.
Blair Hedges, "The Origin and Evolution of Model Organisms", Nature Reviews
Genetics 3, 838-849; doi:10.1038/nrg929, (2002).
5. ^ S Blair Hedges, Jaime E Blair,
Maria L Venturi and Jason L Shoe, "A molecular timescale of eukaryote
evolution and the rise of complex multicellular life", BMC Evolutionary Biology
2004, 4:2 doi:10.1186/1471-2148-4-2, (2004).
6. ^ Seung Yeo Moon-van der Staay,
Rupert De Wachter, Daniel Vaulot, "Oceanic 18S rDNA sequences from picoplankton
reveal unsuspected eukaryotic diversity", Nature, (2001).
7. ^ Elizabeth Pennisi,
"Drafting a Tree", Science, (2003).
8. ^ Richard Dawkins, "The Ancestor's Tale",
(Boston, MA: Houghton Mifflin Company, 2004).
9. ^ S. Blair Hedges, "The Origin and
Evolution of Model Organisms", Nature Reviews Genetics 3, 838-849;
doi:10.1038/nrg929, (2002).
10. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi and
Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise of
complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004).
11. ^ S Blair Hedges, Jaime E Blair, Maria L Venturi
and Jason L Shoe, "A molecular timescale of eukaryote evolution and the rise
of complex multicellular life", BMC Evolutionary Biology 2004, 4:2
doi:10.1186/1471-2148-4-2, (2004). (1609my)
12. ^ Richard Dawkins, "The Ancestor's
Tale", (Boston, MA: Houghton Mifflin Company, 2004). (1500)
13. ^ S. Blair Hedges,
"The Origin and Evolution of Model Organisms", Nature Reviews Genetics 3,
838-849 (2002); doi:10.1038/nrg929, (2002). (1580)
  
475,000,000 YBN
3 4
232) Genetic comparison shows the non-vascular plant and vascular plant lines
splitting now.1 2


FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (c475)
4. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia
Ciniglia, Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (c475)
  
475,000,000 YBN
3 4
233) Genetic comparison shows Liverworts (Plant Division Marchantiophyta)
evolving now.1 2

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (c475)
4. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia
Ciniglia, Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (c475)
  
475,000,000 YBN
4 5
244) Genetic comparison shows non-vascular plants (Bryophytes) (Liverworts,
Hornworts, Mosses) evolving now.1 2

Many people view these plants and the
beginning of the Plant kingdom and algae as being in the Protista kingdom.
These plants
lack vascular tissue that circulates liquids. They neither flower nor produce
seeds, reproducing via spores.
The order these three divisions evolved in is not fully
known.3

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ "Bryophyte".
Wikipedia. Wikipedia, 2008. http://en.wikipedia.org/wiki/Bryophyte
4. ^ S26 (c475)
5. ^ S15 (c475)
  
475,000,000 YBN
352) Subphylum Vertebrata jawless fish lampreys and hagfish lines separate.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
470,000,000 YBN
3 4
234) Genetic comparison shows Hornworts (division Anthocerotophyta) evolving
now.1 2

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (c475)
4. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia
Ciniglia, Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (c475)
  
464,000,000 YBN
398) Earliest fossil spore belonging to land plants. 1
These spores look like
the spores of living liverworts. 2

FOOTNOTES
1. ^ Richard Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
2. ^ Richard
Cowen, "History of Life", (Malden, MA: Blackwell, 2005).
  
460,000,000 YBN
84) Earliest fungi fossil.1
FOOTNOTES
1. ^ Science, Vol 293, Issue 5532, 1129-1133 , 10 August 2001 Molecular
Evidence for the Early Colonization of Land by Fungi and Plants refers to: 4)
M.-A. Selosse and F. LeTacon, Trends Ecol. Evol. 13, 15 (1998)
  
460,000,000 YBN
4 5 6
235) Genetic comparison shows Mosses (division Bryophyta) evolving now.1 2 3
FO
OTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ estimated
from tree on http://tolweb.org/tree?group=Embryophytes&contgroup=Green_
4. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The
plant tree of life: an overview and some points of view", American Journal of
Botany. 2004;91:1437-1445., (2004). (c475)
5. ^ Hwan Su Yoon, Jeremiah D. Hackett,
Claudia Ciniglia, Gabriele Pinto and Debashish, "A Molecular Timeline for the
Origin of Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
(c475)
6. ^ estimated from tree on
http://tolweb.org/tree?group=Embryophytes&contgroup=Green_ (c460)
  
460,000,000 YBN
353) Jawed vertebrates (Infraphylum Gnathostomata) evolve.1 This large group
includes all jawed fish, all amphibians, reptiles, and mammals.


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
460,000,000 YBN
354) Jawed vertebrate (Infraphylum Gnathostomata) Class Chondrichthyes
(cartilaginous fishes) evolve.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
450,000,000 YBN
106) First chordates. The Chordata phylum includes all tunicates, fishes,
amphibians, reptiles, birds, and mammals. The living chordate with the oldest
DNA design are tunicates.1


FOOTNOTES
1. ^ Elizabeth Pennisi, "Drafting a Tree", Science, (2003).
  
443,000,000 YBN
122) Start Silurian period (443-417), end Ordovician period (490-443 mybn).1

FOOTNOTES
1. ^ The geological Society of America
  
440,000,000 YBN
1
360) In the Jawed Fishes, the Ray-finned fishes (Subclass Actinopterygii)
evolve.1

Ray-finned fishes (Subclass Actinopterygii) are in Class
Osteichthyes.

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
428,000,000 YBN
401) Oldest fossil of vascular land plants, Cooksonia. 1 2
Oldest fossil of
vascular land plants, Cooksonia pertoni. 3 4

They have been found in an area stretching from Siberia to the Eastern USA, and
in Brazil. They are found mostly in the area of Euramerica, and most of the
type specimens are from Britain.5

Cooksonia were very small plants, only a few centimetres tall, and had a simple
structure: They didn't have leaves, flowers or seeds. 6 They had a simple
stalk, that branched a few times. Each branch ended in a sporangium, a rounded
structure that contained the spores. No specimen has been found attached to
roots. Either it connected to the ground with very fine root hairs, the fossils
are of fragments, or something entirely unanticipated. Some specimens have a
dark stripe in the centre of their stalks which is interpreted as being the
remains of water carrying tissue. Not all specimens have this stripe, either
some Cooksonia lacked vasular tissue, or it was destroyed in the fossilization
process. 7

FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
2. ^ M. J. Benton, "The Fossil Record 2", (London; New York: Chapman &
Hall, 1993).
3. ^ M. J. Benton, "The Fossil Record 2", (London; New York: Chapman &
Hall, 1993).
4. ^ http://www.uky.edu/KGS/education/timeline2.htm
5. ^ "Cooksonia". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cooksonia
6. ^ http://www.xs4all.nl/~steurh/eng/old1.html#Cook
7. ^ "Cooksonia". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Cooksonia
  
428,000,000 YBN
402) Oldest fossil land animal, the millipede Pneumodesmus. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
425,000,000 YBN
3
377) Coelacanths evolve.1
2 living species known.2
FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
  
417,000,000 YBN
123) Start Devonian period (417-354 mybn), end Silurian period (443-417 mybn).1


FOOTNOTES
1. ^ The geological Society of America
  
417,000,000 YBN
2
378) Lungfishes evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
412,000,000 YBN
403) Oldest fossil lung fish. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
409,000,000 YBN
404) Oldest fossil shark. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
400,000,000 YBN
85) Earliest lichen fossil.1
FOOTNOTES
1. ^ Science, Vol 293, Issue 5532, 1129-1133 , 10 August 2001 Molecular
Evidence for the Early Colonization of Land by Fungi and Plants refers to: T.
N. Taylor, H. Hass, W. Remy, H. Kerp, Nature 378, 244 (1995)
  
400,000,000 YBN
5 6
236) Genetic comparison shows the oldest line of living vascular plants from
the Division "Lycophyta" evolving now.1 2

Genetic comparison shows the oldest
line of living vascular plants (Tracheophytes) from the Division "Lycophyta"
evolving now.3 4

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
4. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
5. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (c400)
6. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia
Ciniglia, Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (c390)
  
400,000,000 YBN
399) Earliest fossil of an insect. 1
This fossil also could have been winged.
2



FOOTNOTES
1. ^
http://www.nhm.ac.uk/nature-online/earth/fossils/article-oldest-insect-fossil/th
e-oldest-fossil-insect-in-the-world.html

2. ^
http://www.nhm.ac.uk/nature-online/earth/fossils/article-oldest-insect-fossil/th
e-oldest-fossil-insect-in-the-world.html


MORE INFO
[1]
http://www.nytimes.com/2004/02/11/science/11CND-INSECT.html?ei=5007&en=01db2c70c
5f2bd18&ex=1391922000&adxnnl=1&partner=USERLAND&adxnnlx=1146391843-YMWQeyxG2RWEx
JKHKf60mQ

  
390,000,000 YBN
355) Cartilaginous Fishes (Class Chondrichthyes) Subclass Subterbranchialia and
Subclass Elasmobranchii (shark-like fishes) separate.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
390,000,000 YBN
356) Subclass Subterbranchialia Superorder Holocephali (chimaeras: eg. elephant
fish) evolves.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
380,000,000 YBN
3 4
243) Genetic comparison shows the Fern line and the line that leads to Seed
Plants (Gymnosperms and Angiosperms) separating now.1 2


FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (318mybn)
4. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia
Ciniglia, Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (350mybn)
  
380,000,000 YBN
1 2
246) Genetic comparison shows the Spore producing and Seed producing plant
lines separating now.1 2

Genetic comparison shows the Spore producing (ferns
and all earlier plants) and Seed producing (Spermatophyta, Gymnosperms and
Angiosperms) plant lines separating now.

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (350mybn)
  
380,000,000 YBN
405) Oldest fossil large trees. First forests. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
380,000,000 YBN
406) Oldest fossil spider. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
375,000,000 YBN
407) Oldest fossil amphibian, and land vertebrate. 1
Oldest fossil amphibian,
Acanthostega , from Greenland Also, the oldest evidence of land vertebrates. 2




FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
2. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
360,000,000 YBN
4 5
237) Genetic comparison shows Ferns (Plant Division "Pteridophyta") evolving
now.1 2

Genetic comparison shows the Plant Division "Pteridophyta" (Ferns)
evolving now.
Whisk and Ophioglossiod ferns, Marattiod ferns, Horsetails,
Lepto. ferns.3

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
4. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W.
Chase, "The plant tree of life: an overview and some points of view", American
Journal of Botany. 2004;91:1437-1445., (2004). (c390 (360 for living species)
5. ^ Hwan
Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia, Gabriele Pinto and Debashish,
"A Molecular Timeline for the Origin of Photosynthetic Eukaryotes", Molecular
Biology and Evolution, (2004). (c390)
  
360,000,000 YBN
408) Devonian mass extinction caused by ice age. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
354,000,000 YBN
124) Start Carboniferous period (354-290 mybn), end Devonian period (417-354
mybn).1


FOOTNOTES
1. ^ The geological Society of America
  
350,000,000 YBN
2
361) In the Ray-finned fishes Superdivision Chondrostei (sturgeons and
paddlefish) evolves.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
350,000,000 YBN
2
362) In the Ray-finned fishes Infradivsion Cladistia (Bichirs) evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
340,000,000 YBN
1
379) Tetrapods evolve.1
(Superclass Tetrapoda)
FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
340,000,000 YBN
1
380) Amphibians (Caecillians, frogs, toads, Salamanders) evolve.1
(Superclass
Tetrapoda, Class Amphibia)

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
330,000,000 YBN
409) Oldest fossil conifer. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
325,000,000 YBN
1
381) The Amphibians Caecillians evolve.1
(Superclass Tetrapoda, Class
Amphibia)

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
320,000,000 YBN
1 2
238) Genetic comparison shows the oldest living Gymnosperms from the Plant
Kingdom evolving now.1 2

Genetic comparison shows the oldest living
Gymnosperms (Greek for "Naked Seed"), Cycads, from the Plant Kingdom evolving
now. These are the first seed bearing plants.

Gymnosperm Plant Divisions are:
Pinophyta - Conifers "Pinaceae" 220 "Other conifers"
400 species
Ginkgophyta - Ginkgo 1 species
Cycadophyta - Cycads 130 species
Gnetophyta - Gnetum,
Ephedra, Welwitschia 80 species

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (c350 (300
for radiation)

MORE INFO
[1] "Gymnosperms". Wikipedia. Wikipedia, 2008.
http://en.wikipedia.org/wiki/Gymnosperms
  
318,000,000 YBN
3 4
242) Genetic comparison shows the Gymnosperms and Angiosperms lines separating
now.1 2


FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (318mybn)
4. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia
Ciniglia, Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004). (350)
  
315,000,000 YBN
410) Oldest fossil reptile. 1
Hylonomus was a small lizard-like reptile that
was trapped in the trunk of a swamp tree in what is now Nova Scotia , Canada.



  
315,000,000 YBN
411) Oldest fossil of flying insect (mayfly?). 1
Oldest fossil of flying
insects (unless Devonian Rhyniognatha had wings). Fossil wings on giant
mayflies, dragonflys, and dragonfly-like arthropods. 2



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
2. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
315,000,000 YBN
453) Allegheny mountains form as a result of the collision of Europe and
eastern North America. 1




FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
310,000,000 YBN
2
384) Egg evolves.1
This group, the Amniota, will branch into the 3 major
Classes: Reptiles (Sauropsida), Birds (Aves), and Mammals (Synapsida).


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
310,000,000 YBN
2
385) Reptiles evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
305,000,000 YBN
1
382) The Amphibians Frogs and Toads evolve.1
(Superclass Tetrapoda, Class
Amphibia)

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
305,000,000 YBN
1
383) Amphibians Salamanders evolve.1
(Superclass Tetrapoda, Class Amphibia)
FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
  
300,000,000 YBN
2
387) Turtles, Tortoises and Terrapins evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
290,000,000 YBN
125) Start Permian period (290-248 mybn), end Carboniferous period (354-290
mybn).1


FOOTNOTES
1. ^ The geological Society of America
  
290,000,000 YBN
3 4
239) Genetic comparison shows the second oldest living Gymnosperm, Ginkgo from
the Plant Kingdom evolving now.1 2

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (c290 (300 for living species)
4. ^ Hwan Su Yoon, Jeremiah
D. Hackett, Claudia Ciniglia, Gabriele Pinto and Debashish, "A Molecular
Timeline for the Origin of Photosynthetic Eukaryotes", Molecular Biology and
Evolution, (2004). (c350 (300 for radiation)
  
280,000,000 YBN
2
388) Anapsids (iguanas and snakes) and diapsids (crocodiles) separate.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
270,000,000 YBN
3 4
240) Genetic comparison shows the third oldest living Gymnosperms, Conifers
(Plant division "Pinophyta") evolving now.1 2

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (c270 (290 for living species)
4. ^ Hwan Su Yoon, Jeremiah
D. Hackett, Claudia Ciniglia, Gabriele Pinto and Debashish, "A Molecular
Timeline for the Origin of Photosynthetic Eukaryotes", Molecular Biology and
Evolution, (2004). (c350 (300 for radiation)
  
260,000,000 YBN
2
363) In the Ray-finned fishes Infradivision Actinopteri evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
260,000,000 YBN
2
364) In the Ray-finned fishes Infradivision Actinopteri, Gars evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
255,000,000 YBN
2
389) Tuataras evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
251,000,000 YBN
452) The supercontinent Pangea forms. 1



FOOTNOTES
1. ^ http://www.uky.edu/KGS/education/timeline2.htm
  
250,000,000 YBN
3 4
241) Genetic comparison shows the fourth oldest living Plant Division
"Gnetales" evolving now.1 2

FOOTNOTES
1. ^ Jeffrey D. Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree
of life: an overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004).
2. ^ Hwan Su Yoon, Jeremiah D. Hackett, Claudia Ciniglia,
Gabriele Pinto and Debashish, "A Molecular Timeline for the Origin of
Photosynthetic Eukaryotes", Molecular Biology and Evolution, (2004).
3. ^ Jeffrey D.
Palmer, Douglas E. Soltis and Mark W. Chase, "The plant tree of life: an
overview and some points of view", American Journal of Botany.
2004;91:1437-1445., (2004). (c250 (270 for living species)
4. ^ Hwan Su Yoon, Jeremiah
D. Hackett, Claudia Ciniglia, Gabriele Pinto and Debashish, "A Molecular
Timeline for the Origin of Photosynthetic Eukaryotes", Molecular Biology and
Evolution, (2004). (c350 (300 for radiation)
  
250,000,000 YBN
396) The Permian mass extinction event happens. 1 This is the most devastating
mass extinction event in the history of earth.

Trilobites become extinct.



MORE INFO
[1] http://www.sciencedaily.com/releases/2006/06/060601174729.htm
[2] http://www.ia.ucsb.edu/pa/display.aspx?pkey=1073
  
248,000,000 YBN
54) End Paleozoic Era, start Mesozoic Era.1 2

FOOTNOTES
1. ^ The geological Society of America ucmp.berkeley.edu
2. ^ Richard Cowen, "History of Life",
(Malden, MA: Blackwell, 2005).
  
248,000,000 YBN
126) Start Triassic period (248-206 mybn), end Permian period (290-248 mybn).1


FOOTNOTES
1. ^ The geological Society of America
  
245,000,000 YBN
2
392) Crocodiles, allegators, caimans evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
245,000,000 YBN
2
393) Birds evolve.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
240,000,000 YBN
2
365) Actinopteri Superdivision Neopterygii evolves.1

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
240,000,000 YBN
2
366) In Superdivision Neopterygii, Subdivision Halecomorphi, Bow fish
(Amiiformes) evolve.1


FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton
Mifflin Company, 2004).
  
240,000,000 YBN
3
367) Bow fish evolve.1
In Superdivision Neopterygii, Division Halecostomi,
Subdivision Halecomorphi, Bow fish (Amiiformes) evolve.2

FOOTNOTES
1. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA: Houghton Mifflin
Company, 2004).
2. ^ http://sn2000.taxonomy.nl/Taxonomicon/TaxonTree.aspx?id=42391
3. ^ Richard Dawkins, "The Ancestor's Tale", (Boston, MA:
Houghton Mifflin Company, 2004).
  
228,000,000 YBN
<